FFCP PHASE1:Hg19::chr16:58768148..58768173,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:58768148..58768173,-
|short_description=p2@GOT2
|description=CAGE_peak_2_at_GOT2_5end
|association_with_transcript=10bp_to_ENST00000245206_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2806 | |EntrezGene=2806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4433 | |HGNC=4433 | ||
|TSSclassifier=strong | |||
|UniProt=P00505 | |UniProt=P00505 | ||
|association_with_transcript=10bp_to_ENST00000245206_5end | |||
|cluster_id=chr16:58768148..58768173,- | |||
|coexpression_cluster_id=C2150 | |||
|description=CAGE_peak_2_at_GOT2_5end | |||
|id=chr16:58768148..58768173,- | |||
|ontology_enrichment_celltype=CL:0000066!7.10e-19!254;CL:0002321!8.63e-07!248;CL:0000213!9.88e-07!57;CL:0000215!9.88e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;8.36e-08;36!CL:0002139;2.36e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.77e-16,253;CL:0000115,1.45e-08,36;CL:0000213,2.95e-08,58;CL:0000215,2.95e-08,58;CL:0002139,1.19e-07,24;CL:0002078,1.34e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.78e-08;31 | |||
|ontology_enrichment_disease=DOID:305!2.96e-10!106;DOID:0050687!5.09e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.13e-09,106;DOID:0050687,1.09e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.39e-19!286;UBERON:0004111!3.36e-19!241;UBERON:0000119!2.07e-17!312;UBERON:0000483!9.09e-17!309;UBERON:0000025!5.95e-16!194;UBERON:0000481!1.32e-13!347;UBERON:0007023!4.77e-11!115;UBERON:0000475!3.33e-10!365;UBERON:0000064!4.62e-10!219;UBERON:0000468!7.63e-10!659;UBERON:0003103!1.98e-09!69;UBERON:0000480!2.06e-09!626;UBERON:0000467!2.81e-09!625;UBERON:0003914!1.47e-08!118;UBERON:0000922!5.81e-08!612;UBERON:0003104!7.11e-08!238;UBERON:0009142!7.11e-08!238;UBERON:0001048!8.61e-08!168;UBERON:0005177!2.48e-07!107;UBERON:0001049!2.48e-07!57;UBERON:0005068!2.48e-07!57;UBERON:0006241!2.48e-07!57;UBERON:0007135!2.48e-07!57;UBERON:0000062!2.52e-07!511;UBERON:0003075!2.81e-07!86;UBERON:0007284!2.81e-07!86;UBERON:0002050!9.59e-07!605;UBERON:0005423!9.59e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;8.70e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.94e-17,240;UBERON:0000025,5.32e-14,192;UBERON:0000119,2.06e-12,309;UBERON:0000483,8.25e-12,306;UBERON:0003103,1.54e-11,68;UBERON:0007023,5.93e-09,114;UBERON:0003914,6.77e-09,117;UBERON:0011216,6.27e-08,223;UBERON:0001048,1.13e-07,160;UBERON:0000489,3.37e-07,31;UBERON:0000058,4.16e-07,19 | |||
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| ||
|short_description=p2@GOT2 | |||
}} | }} |
Latest revision as of 06:32, 17 September 2015
Short description: | p2@GOT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GOT2_5end |
Coexpression cluster: | C2150_left_heart_tongue_diaphragm_skeletal_throat_iPS |
Association with transcript: | 10bp_to_ENST00000245206_5end |
EntrezGene: | GOT2 |
HGNC: | 4433 |
UniProt: | P00505 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.77e-16 | 253 |
endothelial cell | 1.45e-08 | 36 |
lining cell | 2.95e-08 | 58 |
barrier cell | 2.95e-08 | 58 |
endothelial cell of vascular tree | 1.19e-07 | 24 |
meso-epithelial cell | 1.34e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.94e-17 | 240 |
tube | 5.32e-14 | 192 |
cell layer | 2.06e-12 | 309 |
epithelium | 8.25e-12 | 306 |
compound organ | 1.54e-11 | 68 |
adult organism | 5.93e-09 | 114 |
epithelial tube | 6.77e-09 | 117 |
organ system subdivision | 6.27e-08 | 223 |
primordium | 1.13e-07 | 160 |
cavitated compound organ | 3.37e-07 | 31 |
duct | 4.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.13e-09 | 106 |
cell type cancer | 1.09e-07 | 143 |