FFCP PHASE1:Hg19::chr12:130646534..130646542,+: Difference between revisions
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|id=chr12:130646534..130646542,+
|short_description=p5@FZD10
|description=CAGE_peak_5_at_FZD10_5end
|association_with_transcript=-461bp_to_ENST00000229030,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11211 | |EntrezGene=11211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4039 | |HGNC=4039 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULW2,F5H450,Q6NSL8 | |UniProt=Q9ULW2,F5H450,Q6NSL8 | ||
|association_with_transcript=-461bp_to_ENST00000229030,ENST00000539839,NM_007197_5end | |||
|cluster_id=chr12:130646534..130646542,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_5_at_FZD10_5end | |||
|id=chr12:130646534..130646542,+ | |||
|ontology_enrichment_celltype=CL:0002150!3.19e-38!3;CL:0000861!3.19e-38!3;CL:0002253!1.78e-15!2;CL:0000235!2.98e-12!10;CL:0000214!6.73e-11!3;CL:0002563!2.11e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000214;4.27e-34;3!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.27e-34,3;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!1.82e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;7.14e-26;4!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.14e-26,4;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0006915!6.73e-11!3;UBERON:0002018!6.73e-11!3;UBERON:0002217!6.73e-11!3;UBERON:0007616!6.73e-11!3;UBERON:0001052!2.11e-08!4;UBERON:0001242!2.11e-08!4;UBERON:0001262!2.11e-08!4;UBERON:0004786!2.11e-08!4;UBERON:0004808!2.11e-08!4;UBERON:0001277!2.11e-08!4;UBERON:0004905!4.79e-07!5;UBERON:0000982!4.79e-07!5;UBERON:0004770!4.79e-07!5;UBERON:0003350!5.70e-07!5;UBERON:0004907!5.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.27e-34;3!UBERON:0007616;4.27e-34;3!UBERON:0002217;4.27e-34;3!UBERON:0002018;4.27e-34;3!UBERON:0004905;9.39e-14;8!UBERON:0000982;9.39e-14;8!UBERON:0004770;9.39e-14;8!UBERON:0004457;2.19e-12;9!UBERON:0000042;2.19e-12;9!UBERON:0000486;1.22e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.27e-34,3;UBERON:0007616,4.27e-34,3;UBERON:0002217,4.27e-34,3;UBERON:0002018,4.27e-34,3;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12 | |||
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|short_description=p5@FZD10 | |||
}} | }} |
Latest revision as of 08:27, 17 September 2015
Short description: | p5@FZD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FZD10_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | -461bp_to_ENST00000229030, ENST00000539839, NM_007197_5end |
EntrezGene: | FZD10 |
HGNC: | 4039 |
UniProt: | Q9ULW2F5H450Q6NSL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.27e-34 | 3 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.27e-34 | 3 |
layer of synovial tissue | 4.27e-34 | 3 |
synovial joint | 4.27e-34 | 3 |
synovial membrane of synovial joint | 4.27e-34 | 3 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.14e-26 | 4 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |