FFCP PHASE1:Hg19::chr5:179045199..179045248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3187 | |EntrezGene=3187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5041 | |HGNC=5041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-155bp_to_ENST00000519033_5end | |association_with_transcript=-155bp_to_ENST00000519033_5end | ||
|cluster_id=chr5:179045199..179045248,- | |||
|description=CAGE_peak_6_at_HNRNPH1_5end | |description=CAGE_peak_6_at_HNRNPH1_5end | ||
|id=chr5:179045199..179045248,- | |id=chr5:179045199..179045248,- | ||
|ontology_enrichment_celltype=CL:0000037!3.11e-16!172;CL:0000566!3.11e-16!172;CL:0002032!6.17e-16!165;CL:0000837!6.17e-16!165;CL:0002087!5.85e-15!119;CL:0000988!1.92e-14!182;CL:0002031!4.50e-14!124;CL:0000860!1.45e-13!45;CL:0002057!5.56e-13!42;CL:0000738!5.99e-13!140;CL:0000763!4.32e-10!112;CL:0000049!4.32e-10!112;CL:0002009!8.81e-10!65;CL:0002194!4.81e-09!63;CL:0000576!4.81e-09!63;CL:0000040!4.81e-09!63;CL:0000559!4.81e-09!63;CL:0000557!1.65e-08!71;CL:0000839!2.50e-08!70;CL:0000766!9.85e-07!76 | |ontology_enrichment_celltype=CL:0000037!3.11e-16!172;CL:0000566!3.11e-16!172;CL:0002032!6.17e-16!165;CL:0000837!6.17e-16!165;CL:0002087!5.85e-15!119;CL:0000988!1.92e-14!182;CL:0002031!4.50e-14!124;CL:0000860!1.45e-13!45;CL:0002057!5.56e-13!42;CL:0000738!5.99e-13!140;CL:0000763!4.32e-10!112;CL:0000049!4.32e-10!112;CL:0002009!8.81e-10!65;CL:0002194!4.81e-09!63;CL:0000576!4.81e-09!63;CL:0000040!4.81e-09!63;CL:0000559!4.81e-09!63;CL:0000557!1.65e-08!71;CL:0000839!2.50e-08!70;CL:0000766!9.85e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-12;33!CL:0002057;1.86e-12;33!CL:0000473;5.73e-09;39!CL:0000234;5.73e-09;39!CL:0000576;1.14e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.39e-18,168;CL:0002032,7.69e-18,161;CL:0000837,7.69e-18,161;CL:0000988,3.16e-17,177;CL:0002087,8.43e-16,115;CL:0002031,9.48e-15,120;CL:0000738,5.05e-14,136;CL:0000860,6.22e-14,42;CL:0002057,6.22e-14,42;CL:0000473,1.07e-11,48;CL:0000234,1.07e-11,48;CL:0000763,1.37e-11,108;CL:0000049,1.37e-11,108;CL:0002009,2.05e-10,61;CL:0002194,1.38e-09,59;CL:0000576,1.38e-09,59;CL:0000040,1.38e-09,59;CL:0000559,1.38e-09,59;CL:0000557,3.94e-09,67;CL:0000839,1.06e-08,66;CL:0000766,1.93e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-10;42 | |||
|ontology_enrichment_disease=DOID:162!6.71e-20!235;DOID:14566!1.36e-19!239;DOID:0050687!2.51e-12!143;DOID:2531!3.27e-10!51;DOID:0060083!3.27e-10!51;DOID:305!6.42e-08!106;DOID:0050686!4.01e-07!137;DOID:1240!4.40e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.75e-20,235;DOID:14566,1.04e-19,239;DOID:2531,1.13e-11,51;DOID:0060083,1.13e-11,51;DOID:0050687,1.74e-11,143;DOID:1240,3.75e-08,39;DOID:0050686,2.99e-07,137;DOID:305,5.81e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.67e-08!102;UBERON:0003061!2.67e-08!102;UBERON:0002371!9.29e-08!80;UBERON:0001474!6.97e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!2.67e-08!102;UBERON:0003061!2.67e-08!102;UBERON:0002371!9.29e-08!80;UBERON:0001474!6.97e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.74e-08,76;UBERON:0002390,8.04e-08,98;UBERON:0003061,8.04e-08,98;UBERON:0001474,6.07e-07,82 | |||
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| ||
|short_description=p6@HNRNPH1 | |short_description=p6@HNRNPH1 | ||
}} | }} |
Latest revision as of 08:34, 17 September 2015
Short description: | p6@HNRNPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HNRNPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -155bp_to_ENST00000519033_5end |
EntrezGene: | HNRNPH1 |
HGNC: | 5041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.39e-18 | 168 |
hematopoietic oligopotent progenitor cell | 7.69e-18 | 161 |
hematopoietic multipotent progenitor cell | 7.69e-18 | 161 |
hematopoietic cell | 3.16e-17 | 177 |
nongranular leukocyte | 8.43e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.48e-15 | 120 |
leukocyte | 5.05e-14 | 136 |
classical monocyte | 6.22e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.22e-14 | 42 |
defensive cell | 1.07e-11 | 48 |
phagocyte | 1.07e-11 | 48 |
myeloid cell | 1.37e-11 | 108 |
common myeloid progenitor | 1.37e-11 | 108 |
macrophage dendritic cell progenitor | 2.05e-10 | 61 |
monopoietic cell | 1.38e-09 | 59 |
monocyte | 1.38e-09 | 59 |
monoblast | 1.38e-09 | 59 |
promonocyte | 1.38e-09 | 59 |
granulocyte monocyte progenitor cell | 3.94e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.06e-08 | 66 |
myeloid leukocyte | 1.93e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.74e-08 | 76 |
hematopoietic system | 8.04e-08 | 98 |
blood island | 8.04e-08 | 98 |
bone element | 6.07e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.75e-20 | 235 |
disease of cellular proliferation | 1.04e-19 | 239 |
hematologic cancer | 1.13e-11 | 51 |
immune system cancer | 1.13e-11 | 51 |
cell type cancer | 1.74e-11 | 143 |
leukemia | 3.75e-08 | 39 |
organ system cancer | 2.99e-07 | 137 |
carcinoma | 5.81e-07 | 106 |