FFCP PHASE1:Hg19::chr13:41935939..41935949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79612 | |EntrezGene=79612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26164 | |HGNC=26164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-312bp_to_ENST00000463114_5end | |association_with_transcript=-312bp_to_ENST00000463114_5end | ||
|cluster_id=chr13:41935939..41935949,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_9_at_NAA16_5end | |description=CAGE_peak_9_at_NAA16_5end | ||
|id=chr13:41935939..41935949,+ | |id=chr13:41935939..41935949,+ | ||
|ontology_enrichment_celltype=CL:0000349!1.03e-46!3;CL:0002577!1.03e-46!3;CL:0002537!1.74e-28!5;CL:0002541!2.96e-21!3 | |ontology_enrichment_celltype=CL:0000349!1.03e-46!3;CL:0002577!1.03e-46!3;CL:0002537!1.74e-28!5;CL:0002541!2.96e-21!3 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.19e-53;5!CL:0000349;4.52e-32;19!CL:0002577;4.09e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.19e-53,5;CL:0000349,4.52e-32,19;CL:0002577,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.73e-87!14;UBERON:0000158!2.73e-87!14;UBERON:0003124!1.08e-77!7;UBERON:0001987!4.23e-61!4;UBERON:0004340!4.23e-61!4;UBERON:0000478!9.87e-51!24;UBERON:0004923!6.21e-26!57;UBERON:0000476!2.96e-21!3;UBERON:0000920!2.96e-21!3;UBERON:0000305!1.46e-20!7;UBERON:0004871!4.43e-18!8;UBERON:0000995!5.53e-12!21;UBERON:0005795!1.88e-11!22;UBERON:0003975!1.88e-11!22;UBERON:0004175!4.11e-10!25;UBERON:0000064!2.31e-07!219;UBERON:0003134!6.57e-07!37;UBERON:0000474!6.57e-07!37 | |ontology_enrichment_uberon=UBERON:0005631!2.73e-87!14;UBERON:0000158!2.73e-87!14;UBERON:0003124!1.08e-77!7;UBERON:0001987!4.23e-61!4;UBERON:0004340!4.23e-61!4;UBERON:0000478!9.87e-51!24;UBERON:0004923!6.21e-26!57;UBERON:0000476!2.96e-21!3;UBERON:0000920!2.96e-21!3;UBERON:0000305!1.46e-20!7;UBERON:0004871!4.43e-18!8;UBERON:0000995!5.53e-12!21;UBERON:0005795!1.88e-11!22;UBERON:0003975!1.88e-11!22;UBERON:0004175!4.11e-10!25;UBERON:0000064!2.31e-07!219;UBERON:0003134!6.57e-07!37;UBERON:0000474!6.57e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.49e-38;7!UBERON:0005631;2.08e-27;10!UBERON:0000158;2.08e-27;10!UBERON:0000478;1.16e-25;24!UBERON:0001987;1.03e-17;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0000305,1.49e-38,7;UBERON:0004871,6.50e-34,8;UBERON:0000478,1.16e-25,24;UBERON:0001987,1.03e-17,4;UBERON:0004340,1.03e-17,4;UBERON:0003124,9.89e-11,7;UBERON:0004923,4.66e-10,66 | |||
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|short_description=p9@NAA16 | |short_description=p9@NAA16 | ||
}} | }} |
Latest revision as of 09:02, 17 September 2015
Short description: | p9@NAA16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NAA16_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -312bp_to_ENST00000463114_5end |
EntrezGene: | NAA16 |
HGNC: | 26164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.19e-53 | 5 |
extraembryonic cell | 4.52e-32 | 19 |
placental epithelial cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
amnion | 1.49e-38 | 7 |
somatic layer of lateral plate mesoderm | 6.50e-34 | 8 |
extraembryonic structure | 1.16e-25 | 24 |
placenta | 1.03e-17 | 4 |
allantois | 1.03e-17 | 4 |
chorion | 9.89e-11 | 7 |
organ component layer | 4.66e-10 | 66 |