FFCP PHASE1:Hg19::chr1:28415192..28415201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2140 | |EntrezGene=2140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3521 | |HGNC=3521 | ||
|TSSclassifier=strong | |||
|UniProt=Q99504 | |UniProt=Q99504 | ||
|association_with_transcript=5bp_to_ENST00000373871_5end | |association_with_transcript=5bp_to_ENST00000373871_5end | ||
|cluster_id=chr1:28415192..28415201,- | |||
|description=CAGE_peak_3_at_EYA3_5end | |description=CAGE_peak_3_at_EYA3_5end | ||
|id=chr1:28415192..28415201,- | |id=chr1:28415192..28415201,- | ||
|ontology_enrichment_celltype=CL:0002057!3.54e-17!42;CL:0002194!3.94e-17!63;CL:0000576!3.94e-17!63;CL:0000040!3.94e-17!63;CL:0000559!3.94e-17!63;CL:0002009!4.20e-17!65;CL:0000839!1.39e-16!70;CL:0000557!3.44e-16!71;CL:0000860!3.61e-16!45;CL:0000766!4.50e-16!76;CL:0000763!1.37e-15!112;CL:0000049!1.37e-15!112;CL:0002032!4.30e-13!165;CL:0000837!4.30e-13!165;CL:0000037!6.86e-13!172;CL:0000566!6.86e-13!172;CL:0002031!1.33e-12!124;CL:0002087!1.90e-12!119;CL:0000738!1.13e-11!140;CL:0000988!8.48e-11!182 | |ontology_enrichment_celltype=CL:0002057!3.54e-17!42;CL:0002194!3.94e-17!63;CL:0000576!3.94e-17!63;CL:0000040!3.94e-17!63;CL:0000559!3.94e-17!63;CL:0002009!4.20e-17!65;CL:0000839!1.39e-16!70;CL:0000557!3.44e-16!71;CL:0000860!3.61e-16!45;CL:0000766!4.50e-16!76;CL:0000763!1.37e-15!112;CL:0000049!1.37e-15!112;CL:0002032!4.30e-13!165;CL:0000837!4.30e-13!165;CL:0000037!6.86e-13!172;CL:0000566!6.86e-13!172;CL:0002031!1.33e-12!124;CL:0002087!1.90e-12!119;CL:0000738!1.13e-11!140;CL:0000988!8.48e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-47;33!CL:0002057;2.18e-47;33!CL:0000473;2.74e-32;39!CL:0000234;2.74e-32;39!CL:0000576;1.87e-24;48!CL:0000766;1.28e-13;69!CL:0000763;2.79e-08;100!CL:0002087;2.11e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-45,42;CL:0002057,1.56e-45,42;CL:0000473,2.21e-39,48;CL:0000234,2.21e-39,48;CL:0002009,3.78e-33,61;CL:0002194,9.17e-31,59;CL:0000576,9.17e-31,59;CL:0000040,9.17e-31,59;CL:0000559,9.17e-31,59;CL:0000557,7.03e-30,67;CL:0000839,3.67e-27,66;CL:0000766,1.27e-24,72;CL:0000763,1.06e-23,108;CL:0000049,1.06e-23,108;CL:0002031,4.49e-15,120;CL:0002032,1.73e-14,161;CL:0000837,1.73e-14,161;CL:0002087,4.09e-14,115;CL:0000037,1.06e-13,168;CL:0000738,7.40e-13,136;CL:0000988,8.75e-13,177;CL:0000134,5.59e-07,354;CL:0002320,9.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.00e-34;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.60e-13!80;UBERON:0001474!2.23e-13!86;UBERON:0002390!2.61e-11!102;UBERON:0003061!2.61e-11!102;UBERON:0004765!2.10e-10!101;UBERON:0001434!2.10e-10!101;UBERON:0002193!1.41e-09!112;UBERON:0002405!3.44e-09!115 | |ontology_enrichment_uberon=UBERON:0002371!1.60e-13!80;UBERON:0001474!2.23e-13!86;UBERON:0002390!2.61e-11!102;UBERON:0003061!2.61e-11!102;UBERON:0004765!2.10e-10!101;UBERON:0001434!2.10e-10!101;UBERON:0002193!1.41e-09!112;UBERON:0002405!3.44e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.63e-07;1!UBERON:0009661;1.63e-07;1!UBERON:0002950;1.63e-07;1!UBERON:0001891;1.63e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.26e-26,76;UBERON:0001474,9.01e-24,82;UBERON:0004765,2.45e-21,90;UBERON:0002405,1.57e-20,93;UBERON:0002390,2.70e-19,98;UBERON:0003061,2.70e-19,98;UBERON:0001434,7.77e-19,100;UBERON:0002193,3.64e-17,108;UBERON:0002204,9.09e-10,167;UBERON:0003081,2.38e-08,203;UBERON:0002038,2.04e-07,1;UBERON:0009661,2.04e-07,1;UBERON:0002950,2.04e-07,1;UBERON:0001891,2.04e-07,1;UBERON:0009616,2.04e-07,1;UBERON:0010286,2.04e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0,0,0,0.458480434487708,0.492603536699674,0.314843125254717,0.393364276848904,0.383829398097213,0,0,0,0,0.232401601740905,0.710846162437108,0,1.10799081706375,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0.515151135268373,0.581592955118259,0.377875943688809,0.727752183563449,0.929716147622738,0.411167888021826,2.16794459626573,1.43846196161075,3.33008918487831,2.36482229888585,0.344745680736619,1.29096936716765,0,1.12945403725563,0.272906150057846,1.34834090667051,0.612167784741805,0.962787081228281,0.639337125799041,2.30895910130701,1.79517291859469,2.98357325372886,0.870627715885752,3.40431134814684,4.35975574296902,1.00499466102697,0.521482918420201,3.47502151528187,1.81619850790011,1.47311054395026,3.48108626184973,0.422510572623884,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0.786839080455332,0,0.822405995998037,0,0.32592226663359,0.946895611469467,0,0.222820913770347,0,0,0.270803863765016,0.384273959177026,0.520237390239513,0.493313713811028,0,0,0.444859689486181,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.916853528483988,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0.81014194788176,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.352303495931295,0.323745888736263,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.403008392910561,0,0.386521706326594,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0.12624243342638,0.190493682876507,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.591092280605782,0.431255149719035,0.256686072559497,0.508189248444927,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.415941723061614,0,0,0.234282829985426,0,0,1.03473071292505,0,0,0,0,0,0.413536052245775,0.647142602455851,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0.438519753291869,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0.145016693914229,0.340906509664404,0.356128142586949,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,1.48171507906718,0,0.280797178113459,0,0.783399478865116,0,0.50787533340481,0.642352300414798,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.500547425135725,0.19538809540204,0.278406173895242,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0.296964680832639,0.307160702099232,0,1.26602474769461,0.222617410045812,0.16480387422676,0,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.615424027305347,0.311039587661807,0.0898683511473268,0,1.02314474045374,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.60298219312704,0,0.331737779793674,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0.10864737192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| ||
|short_description=p3@EYA3 | |short_description=p3@EYA3 | ||
}} | }} |
Latest revision as of 09:27, 17 September 2015
Short description: | p3@EYA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EYA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000373871_5end |
EntrezGene: | EYA3 |
HGNC: | 3521 |
UniProt: | Q99504 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-45 | 42 |
defensive cell | 2.21e-39 | 48 |
phagocyte | 2.21e-39 | 48 |
macrophage dendritic cell progenitor | 3.78e-33 | 61 |
monopoietic cell | 9.17e-31 | 59 |
monocyte | 9.17e-31 | 59 |
monoblast | 9.17e-31 | 59 |
promonocyte | 9.17e-31 | 59 |
granulocyte monocyte progenitor cell | 7.03e-30 | 67 |
myeloid lineage restricted progenitor cell | 3.67e-27 | 66 |
myeloid leukocyte | 1.27e-24 | 72 |
myeloid cell | 1.06e-23 | 108 |
common myeloid progenitor | 1.06e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 4.49e-15 | 120 |
hematopoietic oligopotent progenitor cell | 1.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-14 | 161 |
nongranular leukocyte | 4.09e-14 | 115 |
hematopoietic stem cell | 1.06e-13 | 168 |
leukocyte | 7.40e-13 | 136 |
hematopoietic cell | 8.75e-13 | 177 |
mesenchymal cell | 5.59e-07 | 354 |
connective tissue cell | 9.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.26e-26 | 76 |
bone element | 9.01e-24 | 82 |
skeletal element | 2.45e-21 | 90 |
immune system | 1.57e-20 | 93 |
hematopoietic system | 2.70e-19 | 98 |
blood island | 2.70e-19 | 98 |
skeletal system | 7.77e-19 | 100 |
hemolymphoid system | 3.64e-17 | 108 |
musculoskeletal system | 9.09e-10 | 167 |
lateral plate mesoderm | 2.38e-08 | 203 |
substantia nigra | 2.04e-07 | 1 |
midbrain nucleus | 2.04e-07 | 1 |
regional part of midbrain | 2.04e-07 | 1 |
midbrain | 2.04e-07 | 1 |
presumptive midbrain | 2.04e-07 | 1 |
midbrain neural tube | 2.04e-07 | 1 |