FFCP PHASE1:Hg19::chr13:42622781..42622787,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:42622781..42622787,+ to FFCP PHASE1:Hg19::chr13:42622781..42622787,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=160851 | |EntrezGene=160851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2854 | |HGNC=2854 | ||
|TSSclassifier=strong | |||
|UniProt=B4DYW1,Q86XP1,B4DZ34 | |UniProt=B4DYW1,Q86XP1,B4DZ34 | ||
|association_with_transcript=-55bp_to_NM_152910,NM_178009_5end | |||
|cluster_id=chr13:42622781..42622787,+ | |||
|description=CAGE_peak_1_at_DGKH_5end | |||
|id=chr13:42622781..42622787,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.48e-29!42;CL:0000860!2.58e-27!45;CL:0000557!9.76e-24!71;CL:0000839!1.33e-22!70;CL:0002009!6.86e-21!65;CL:0002194!2.40e-19!63;CL:0000576!2.40e-19!63;CL:0000040!2.40e-19!63;CL:0000559!2.40e-19!63;CL:0000766!3.32e-19!76;CL:0000763!9.17e-17!112;CL:0000049!9.17e-17!112;CL:0002031!3.20e-15!124;CL:0000738!1.50e-14!140;CL:0002032!1.32e-12!165;CL:0000837!1.32e-12!165;CL:0000037!1.51e-12!172;CL:0000566!1.51e-12!172;CL:0000988!3.67e-11!182;CL:0002087!4.22e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.80e-39;33!CL:0002057;5.80e-39;33!CL:0000473;5.75e-30;39!CL:0000234;5.75e-30;39!CL:0000576;1.35e-22;48!CL:0000766;1.47e-15;69!CL:0000763;1.70e-08;100!CL:0000453;1.11e-07;5!CL:0000197;3.34e-07;6!CL:0000098;3.34e-07;6!CL:0002167;3.34e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.42e-42,42;CL:0002057,3.42e-42,42;CL:0000473,1.40e-39,48;CL:0000234,1.40e-39,48;CL:0000557,2.70e-36,67;CL:0000839,1.94e-34,66;CL:0002009,2.31e-31,61;CL:0000766,2.98e-29,72;CL:0002194,7.58e-29,59;CL:0000576,7.58e-29,59;CL:0000040,7.58e-29,59;CL:0000559,7.58e-29,59;CL:0000763,4.42e-28,108;CL:0000049,4.42e-28,108;CL:0002031,2.14e-22,120;CL:0000738,9.37e-21,136;CL:0002032,7.07e-20,161;CL:0000837,7.07e-20,161;CL:0000037,5.60e-19,168;CL:0000988,4.88e-17,177;CL:0002087,2.00e-15,115;CL:0000453,1.15e-07,5;CL:0000197,2.32e-07,6;CL:0000098,2.32e-07,6;CL:0002167,2.32e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-30;42!CL:0000049;1.65e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.87e-20!80;UBERON:0001474!4.25e-18!86;UBERON:0004765!1.46e-15!101;UBERON:0001434!1.46e-15!101;UBERON:0002390!6.68e-15!102;UBERON:0003061!6.68e-15!102;UBERON:0002193!1.93e-13!112;UBERON:0002405!8.69e-13!115;UBERON:0002204!1.77e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.80e-30,76;UBERON:0001474,8.17e-27,82;UBERON:0004765,2.11e-25,90;UBERON:0002405,4.39e-24,93;UBERON:0001434,2.60e-21,100;UBERON:0002390,5.34e-21,98;UBERON:0003061,5.34e-21,98;UBERON:0002193,1.28e-18,108;UBERON:0002204,8.89e-12,167;UBERON:0003081,4.40e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,6.81190942590734,0,0,0,0,0,0.880801318004542,0.553995408531877,0.200544447470142,0,0.223915474239924,0,0,3.48955773070955,3.77875943688809,5.57943340731977,2.32429036905685,4.93401465626191,7.43295290148249,3.74000110018796,5.89169625016932,3.31075121844019,3.7922024881028,10.973239620925,2.70852973188684,3.9530891303947,6.27684145133045,5.16864014223695,4.28517449319264,3.85114832491312,7.67204550958849,2.30895910130701,4.18873681005427,4.68847225585964,4.35313857942876,10.2129340444405,3.73693349397345,3.76872997885115,6.25779502104242,5.64690996233303,1.21079900526674,4.78760926783834,5.37986058649504,1.05627643155971,4.03948169933583,2.72556239160889,2.13424399178341,4.35512989240368,2.73233497385036,0.285012743741249,2.58591680358817,2.37463399894024,0,1.09227722252426,0,1.70692089026603,0,0.574752439954483,1.32208974556972,2.86216126360609,0,0,0,0,0,2.10707267820062,0,0,0,3.34372990781356,0.651844533267181,0.946895611469467,0,5.23629147360316,4.12448270464772,4.2091439970888,5.1452734115353,2.94610035369053,4.42201781703586,2.63100647365882,1.93445012450094,1.73881851441031,4.89345658434799,9.36392898313996,1.04535523804977,3.62589896632212,1.53288197440768,0.34362744548263,8.34964983664359,0.637130828648193,0.651083453856419,0,0.602300476311091,1.15187950038977,0,1.18388626022008,1.64225599384209,0,0,0,0,0,2.30152611318355,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76673050927588,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.103052529238439,0,0,4.38818463827292,0,0,0,4.84938170456436,0,0,0,0,0,0,0,0,0.116193942869518,0,1.26160425437814,1.09493207722749,0,0,0,0,0,1.30137480043828,1.68584690078102,0.723033089650446,0.661763836394364,0.871517776369625,1.18635309555548,1.48314438976181,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0,0,0,3.60292401626904,0,0,0.201057944823262,0,0,0,0,1.97081688457631,2.11335649624479,0,1.85194205030644,0.761016608938393,0,0,0,0,0,0,1.34385702559088,1.98485136139341,0.179117045405697,0,0,0,2.20121085033065,6.01251535068239,5.90891809009542,6.312121671319,2.09543051164158,0,0,0,0,3.00343057843917,4.0015700568281,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,2.43247561282381,4.01805673145701,0,0,0,5.70547620162874,0,0,0,0,0,0,0.128343036279748,0,0,0,0,3.82763250991898,0,0,0,0.12269149171914,0,0,1.45579603071565,3.39015078714607,2.99634588564476,1.40569697991256,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0.248107807818777,3.06923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,1.53481913652154,1.8300481571743,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,11.357531412018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,1.14729081763241,2.45622602532803,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0.383010740264733,0,2.921597462471,0,0,0,12.5317238545034,4.06300266723848,0,0,0,0,0,0,0.166849141711909,0,0,0,1.08182271390393,0,0,0,0,0,0,0,4.05865624054073,2.07875276582847,0,2.98244294329889,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,4.42870692906919,1.20596438625408,3.05163472634166,0.110579259931225,0,0.438770794307945,0.10893846351899,0.139423744278603,0,0,0,0,0,5.42301971544263,3.48070854927077,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0.114536596165916,0,0,0,0,0.407712618220842,0.209205692624666,0,0,9.60672461935663,0.136905378891993,2.55493176133945,0,0.525774708558629,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,7.95229689809303,0,1.76828463311521,1.65047323916681,4.56984371832104,6.07429507189051,10.0594254092533,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.93924434542326,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0,0.327872630709804,0.157054096250234,2.65820453990096,2.44052529803926,0,3.44045517414043,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p1@DGKH | |||
}} | }} |
Latest revision as of 09:36, 17 September 2015
Short description: | p1@DGKH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DGKH_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_NM_152910, NM_178009_5end |
EntrezGene: | DGKH |
HGNC: | 2854 |
UniProt: | B4DYW1Q86XP1B4DZ34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.42e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.42e-42 | 42 |
defensive cell | 1.40e-39 | 48 |
phagocyte | 1.40e-39 | 48 |
granulocyte monocyte progenitor cell | 2.70e-36 | 67 |
myeloid lineage restricted progenitor cell | 1.94e-34 | 66 |
macrophage dendritic cell progenitor | 2.31e-31 | 61 |
myeloid leukocyte | 2.98e-29 | 72 |
monopoietic cell | 7.58e-29 | 59 |
monocyte | 7.58e-29 | 59 |
monoblast | 7.58e-29 | 59 |
promonocyte | 7.58e-29 | 59 |
myeloid cell | 4.42e-28 | 108 |
common myeloid progenitor | 4.42e-28 | 108 |
hematopoietic lineage restricted progenitor cell | 2.14e-22 | 120 |
leukocyte | 9.37e-21 | 136 |
hematopoietic oligopotent progenitor cell | 7.07e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.07e-20 | 161 |
hematopoietic stem cell | 5.60e-19 | 168 |
hematopoietic cell | 4.88e-17 | 177 |
nongranular leukocyte | 2.00e-15 | 115 |
Langerhans cell | 1.15e-07 | 5 |
receptor cell | 2.32e-07 | 6 |
sensory epithelial cell | 2.32e-07 | 6 |
olfactory epithelial cell | 2.32e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.80e-30 | 76 |
bone element | 8.17e-27 | 82 |
skeletal element | 2.11e-25 | 90 |
immune system | 4.39e-24 | 93 |
skeletal system | 2.60e-21 | 100 |
hematopoietic system | 5.34e-21 | 98 |
blood island | 5.34e-21 | 98 |
hemolymphoid system | 1.28e-18 | 108 |
musculoskeletal system | 8.89e-12 | 167 |
lateral plate mesoderm | 4.40e-08 | 203 |