FFCP PHASE1:Hg19::chr1:29063287..29063301,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |EntrezGene=51441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |HGNC=31675 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5A9 | |UniProt=Q9Y5A9 | ||
|association_with_transcript=16bp_to_ENST00000373812_5end | |association_with_transcript=16bp_to_ENST00000373812_5end | ||
|cluster_id=chr1:29063287..29063301,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_7_at_YTHDF2_5end | |description=CAGE_peak_7_at_YTHDF2_5end | ||
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|ontology_enrichment_celltype=CL:0000039!5.55e-07!7;CL:0000586!5.55e-07!7 | |ontology_enrichment_celltype=CL:0000039!5.55e-07!7;CL:0000586!5.55e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-32;7!CL:0000586;1.28e-32;7!CL:0002322;4.57e-32;5!CL:0000540;1.33e-10;6!CL:0000404;1.33e-10;6!CL:0002321;1.42e-10;15!CL:0002032;1.97e-07;1!CL:0002553;1.97e-07;1!CL:0000557;1.97e-07;1 | |ontology_enrichment_celltype_v019=CL:0000039;1.28e-32;7!CL:0000586;1.28e-32;7!CL:0002322;4.57e-32;5!CL:0000540;1.33e-10;6!CL:0000404;1.33e-10;6!CL:0002321;1.42e-10;15!CL:0002032;1.97e-07;1!CL:0002553;1.97e-07;1!CL:0000557;1.97e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.80e-33,7;CL:0000586,9.80e-33,7;CL:0002322,5.38e-32,5;CL:0000540,1.35e-10,6;CL:0000031,1.35e-10,6;CL:0000404,1.35e-10,6;CL:0000047,4.70e-08,8;CL:0002553,1.39e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.57e-23;10!UBERON:0005564;9.57e-23;10!CL:0000031;1.33e-10;6!UBERON:0010227;1.97e-07;1 | |ontology_enrichment_development_v019=UBERON:0009117;9.57e-23;10!UBERON:0005564;9.57e-23;10!CL:0000031;1.33e-10;6!UBERON:0010227;1.97e-07;1 | ||
|ontology_enrichment_disease=DOID:14566!4.40e-10!239;DOID:162!5.42e-10!235;DOID:0050687!2.49e-08!143;DOID:305!7.62e-08!106 | |ontology_enrichment_disease=DOID:14566!4.40e-10!239;DOID:162!5.42e-10!235;DOID:0050687!2.49e-08!143;DOID:305!7.62e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.31e-17;22!DOID:2994;1.31e-17;22!DOID:0050619;1.97e-07;1!DOID:1357;1.97e-07;1 | |ontology_enrichment_disease_v019=DOID:3095;1.31e-17;22!DOID:2994;1.31e-17;22!DOID:0050619;1.97e-07;1!DOID:1357;1.97e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.19e-17,22;DOID:2994,1.19e-17,22;DOID:0050619,1.30e-07,1;DOID:1357,1.30e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.73e-20;8!UBERON:0003135;1.55e-14;11!UBERON:0000991;1.50e-10;21!UBERON:0002079;1.97e-07;1!UBERON:0001764;1.97e-07;1!UBERON:0001825;1.97e-07;1!UBERON:0003101;3.81e-07;22!UBERON:0000079;3.81e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.73e-20;8!UBERON:0003135;1.55e-14;11!UBERON:0000991;1.50e-10;21!UBERON:0002079;1.97e-07;1!UBERON:0001764;1.97e-07;1!UBERON:0001825;1.97e-07;1!UBERON:0003101;3.81e-07;22!UBERON:0000079;3.81e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.66e-20,8;UBERON:0003135,1.77e-14,11;UBERON:0000991,1.63e-10,21;UBERON:0009196,1.63e-10,21;UBERON:0009117,1.63e-10,21;UBERON:0005564,1.63e-10,21;UBERON:0004176,5.21e-10,22;UBERON:0001764,1.30e-07,1;UBERON:0001825,1.30e-07,1;UBERON:0002079,1.80e-07,1;UBERON:0003101,4.05e-07,22;UBERON:0000079,4.05e-07,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0.602694528023977,0,0,0.861847406537515,0,0.626909442956176,0.286235987131057,0.410623275218653,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.309868802321207,0.426507697462265,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0,0.175669571386252,0.327447688744282,0,0,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.535798369704479,0.673588117878509,0.675668882899933,1.53316637465883,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0.822041490506354,0.647491777472526,0.842704840213491,0,0.737005903870608,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0.375355559615893,0,0.877955241761676,0.30648779579902,0,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0.545492241181669,0,3.90315859614705,7.1566074893602,4.4153698290417,2.07322110030741,2.27088765788066,7.66452454059243,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0,0,0.560655421726804,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0.271265023699736,0,0.356857977594324,0,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.728364672026868,0.393373244878272,0,0.308061348417659,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0,0.671624264166535,0.219259876645935,0,0.512900250232778,0.656029291399411,0.325378394664303,0.515205058238611,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,1.06031162111118,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0.689170200620878,0,0,0,0.238231775457789,0,0,0,0,0.534120355637366,0,0.980160863924127,0.185803175125719,0.577076851905779,0.284567373393656,0,0.399158742865633,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0.47003968731907,0,0.338583555603207,0.1605880751037,0.403599414382095,0,0.343505344755765,0.614481528616916,0.671028323677248,0,0.586164286206121,0.278406173895242,0,0.811367035427949,0.66614393599564,0,0,0,0.242721043499027,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0.227586896570999,0.762760950878299,0.236387681767936,0.689486746482929,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,2.99733075704478,1.43612231055635,0.869178975376065,0,0.0915975934018623,0,0,0.470940769185074,0.498635045700469,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0,0,0.0674011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| ||
|short_description=p7@YTHDF2 | |short_description=p7@YTHDF2 | ||
}} | }} |
Latest revision as of 10:58, 17 September 2015
Short description: | p7@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_YTHDF2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 16bp_to_ENST00000373812_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | Q9Y5A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.80e-33 | 7 |
germ cell | 9.80e-33 | 7 |
embryonic stem cell | 5.38e-32 | 5 |
neuron | 1.35e-10 | 6 |
neuroblast | 1.35e-10 | 6 |
electrically signaling cell | 1.35e-10 | 6 |
neuronal stem cell | 4.70e-08 | 8 |
lung fibroblast | 1.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 5.66e-20 | 8 |
male reproductive organ | 1.77e-14 | 11 |
gonad | 1.63e-10 | 21 |
indifferent external genitalia | 1.63e-10 | 21 |
indifferent gonad | 1.63e-10 | 21 |
gonad primordium | 1.63e-10 | 21 |
external genitalia | 5.21e-10 | 22 |
maxillary sinus | 1.30e-07 | 1 |
paranasal sinus | 1.30e-07 | 1 |
left cardiac atrium | 1.80e-07 | 1 |
male organism | 4.05e-07 | 22 |
male reproductive system | 4.05e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.19e-17 | 22 |
germ cell cancer | 1.19e-17 | 22 |
paranasal sinus cancer | 1.30e-07 | 1 |
maxillary sinus cancer | 1.30e-07 | 1 |