FFCP PHASE1:Hg19::chr19:35759387..35759398,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35759387..35759398,+ to FFCP PHASE1:Hg19::chr19:35759387..35759398,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7392 | |EntrezGene=7392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12594 | |HGNC=12594 | ||
|TSSclassifier=strong | |||
|UniProt=Q15853,Q6YI47 | |UniProt=Q15853,Q6YI47 | ||
|association_with_transcript=-497bp_to_ENST00000222305,ENST00000343550,NM_003367,NM_207291,uc002nyq.1,uc002nyr.1,uc002nys.1,uc002nyt.1,uc010xss.1_5end | |||
|cluster_id=chr19:35759387..35759398,+ | |||
|description=CAGE_peak_6_at_USF2_5end | |||
|id=chr19:35759387..35759398,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.42e-10!124;CL:0000860!3.03e-10!45;CL:0002057!3.58e-10!42;CL:0000738!5.09e-10!140;CL:0002087!1.25e-09!119;CL:0000988!1.70e-09!182;CL:0000839!3.69e-09!70;CL:0000557!4.41e-09!71;CL:0000037!4.44e-09!172;CL:0000566!4.44e-09!172;CL:0002009!1.81e-08!65;CL:0002032!3.90e-08!165;CL:0000837!3.90e-08!165;CL:0002194!7.33e-08!63;CL:0000576!7.33e-08!63;CL:0000040!7.33e-08!63;CL:0000559!7.33e-08!63;CL:0000766!1.46e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.34e-08;2!CL:0000860;3.46e-07;33!CL:0002057;3.46e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.69e-08,2;CL:0000557,4.79e-08,67;CL:0000473,1.53e-07,48;CL:0000234,1.53e-07,48;CL:0000766,2.57e-07,72;CL:0000860,2.96e-07,42;CL:0002057,2.96e-07,42;CL:0000839,6.13e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.20e-10!102;UBERON:0003061!6.20e-10!102;UBERON:0002193!3.01e-08!112;UBERON:0002371!8.85e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.34e-08;2!UBERON:0005058;1.34e-08;2!UBERON:0009113;1.34e-08;2!UBERON:0004177;2.09e-07;5!UBERON:0005057;2.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.36e-12,98;UBERON:0003061,3.36e-12,98;UBERON:0002193,1.26e-10,108;UBERON:0002405,4.29e-09,93;UBERON:0003081,3.16e-08,203;UBERON:0002371,6.40e-08,76;UBERON:0001474,4.06e-07,82 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0.572471974262113,0.136874425072884,0.502170558379211,0.305653622991805,0.410502947249729,0.393553906568396,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0.369754010166788,0.154934401160603,0.426507697462265,0.293600439334847,0.553995408531877,1.20326668482085,0.868043482863407,0,0.32389366601898,0.77272670290256,0.872389432677388,0.755751887377619,0.485168122375632,1.16214518452842,2.05583944010913,0.929119112685311,0.863077176966451,0.512321413058201,0.47296445977717,0.344745680736619,1.93645405075148,1.35426486594342,0.752969358170419,0.818718450173537,0.224723484445085,1.22433556948361,0.320929027076094,1.91801137739712,0,0.997318288108159,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0.422510572623884,0.850417199860174,0,0.561643155732475,1.05123824989054,0.32145117339416,0.285012743741249,0.39783335439818,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,0,0,0.983548850569165,0.786021525498329,0.616804496998528,0.334372990781356,0.651844533267181,0,0,1.33692548262208,0,0.221533894583621,0,0.25618263945135,0.520237390239513,0.822189523018381,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0,0.639933055772092,0,0.710331756132051,0.821127996921047,0.201606743224732,0.267440195783507,1.01377082717959,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0,0.0945348171640679,0,0.263504357079378,0.196468613246569,1.09288586487763,0,0,0.174129737299267,0.797747763113191,0.476981248610684,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.446498641420399,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0,0.587172493218824,0.647491777472526,0.280901613404497,0.204154171254893,0.368502951935304,0.413303124703062,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0,0,0,0.487894824518382,0,0.116193942869518,0.310983165046111,0,0,1.56449532329816,0,0,0,0.721879481669586,0.354920400119532,0.674338760312407,0.241011029883482,0.441175890929576,0,1.42362371466658,0.269662616320329,0.392442930250692,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,1.1240175325762,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.579652024875384,0.234817388471643,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.702012795417713,0.445893486866185,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.880484340132261,1.24396869324463,0.576479813667846,1.38866676769018,0.190493682876507,1.14596527667483,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,2.08014873822732,0,1.41849132023278,0,0.57191197463259,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0.672510863961164,0.197030760201927,1.2937654491571,1.02674429023799,0.254094624222463,2.60279707715243,0.773288812777695,0,0,2.24702107184155,0,0,0.49076596687656,0,0,0,0,0.315404830067869,0.585707074963566,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.347534457872331,1.17480694477644,1.02943027143257,1.24060815673732,0.647142602455851,0.960548020230999,0,0,0.907170879989041,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0.920809889358963,0,0,0.131124414959424,0,0,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0.657779629937804,0.261435451024901,0,0,0,0.9273691048295,0.457847324091717,0.41254749960294,0,0,0,0.096670718292122,0,0.307007349452259,0,0.322260734604821,0.435050081742686,0.340906509664404,0.0890320356467374,0.330569830721956,0.384380134730212,0,0.4046311234222,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0.274537029736055,0,1.01091240786658,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,1.12678241012897,0,0.196498082026242,0.3566710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|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0.572471974262113,0.136874425072884,0.502170558379211,0.305653622991805,0.410502947249729,0.393553906568396,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0.369754010166788,0.154934401160603,0.426507697462265,0.293600439334847,0.553995408531877,1.20326668482085,0.868043482863407,0,0.32389366601898,0.77272670290256,0.872389432677388,0.755751887377619,0.485168122375632,1.16214518452842,2.05583944010913,0.929119112685311,0.863077176966451,0.512321413058201,0.47296445977717,0.344745680736619,1.93645405075148,1.35426486594342,0.752969358170419,0.818718450173537,0.224723484445085,1.22433556948361,0.320929027076094,1.91801137739712,0,0.997318288108159,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0.422510572623884,0.850417199860174,0,0.561643155732475,1.05123824989054,0.32145117339416,0.285012743741249,0.39783335439818,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,0,0,0.983548850569165,0.786021525498329,0.616804496998528,0.334372990781356,0.651844533267181,0,0,1.33692548262208,0,0.221533894583621,0,0.25618263945135,0.520237390239513,0.822189523018381,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0,0.639933055772092,0,0.710331756132051,0.821127996921047,0.201606743224732,0.267440195783507,1.01377082717959,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0,0.0945348171640679,0,0.263504357079378,0.196468613246569,1.09288586487763,0,0,0.174129737299267,0.797747763113191,0.476981248610684,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.446498641420399,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0,0.587172493218824,0.647491777472526,0.280901613404497,0.204154171254893,0.368502951935304,0.413303124703062,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0,0,0,0.487894824518382,0,0.116193942869518,0.310983165046111,0,0,1.56449532329816,0,0,0,0.721879481669586,0.354920400119532,0.674338760312407,0.241011029883482,0.441175890929576,0,1.42362371466658,0.269662616320329,0.392442930250692,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,1.1240175325762,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.579652024875384,0.234817388471643,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.702012795417713,0.445893486866185,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.880484340132261,1.24396869324463,0.576479813667846,1.38866676769018,0.190493682876507,1.14596527667483,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,2.08014873822732,0,1.41849132023278,0,0.57191197463259,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0.672510863961164,0.197030760201927,1.2937654491571,1.02674429023799,0.254094624222463,2.60279707715243,0.773288812777695,0,0,2.24702107184155,0,0,0.49076596687656,0,0,0,0,0.315404830067869,0.585707074963566,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.347534457872331,1.17480694477644,1.02943027143257,1.24060815673732,0.647142602455851,0.960548020230999,0,0,0.907170879989041,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0.920809889358963,0,0,0.131124414959424,0,0,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0.657779629937804,0.261435451024901,0,0,0,0.9273691048295,0.457847324091717,0.41254749960294,0,0,0,0.096670718292122,0,0.307007349452259,0,0.322260734604821,0.435050081742686,0.340906509664404,0.0890320356467374,0.330569830721956,0.384380134730212,0,0.4046311234222,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0.274537029736055,0,1.01091240786658,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,1.12678241012897,0,0.196498082026242,0.3566710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| ||
|short_description=p6@USF2 | |||
}} | }} |
Latest revision as of 11:10, 17 September 2015
Short description: | p6@USF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_USF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -497bp_to_ENST00000222305, ENST00000343550, NM_003367, NM_207291, uc002nyq.1, uc002nyr.1, uc002nys.1, uc002nyt.1, uc010xss.1_5end |
EntrezGene: | USF2 |
HGNC: | 12594 |
UniProt: | Q15853Q6YI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.69e-08 | 2 |
granulocyte monocyte progenitor cell | 4.79e-08 | 67 |
defensive cell | 1.53e-07 | 48 |
phagocyte | 1.53e-07 | 48 |
myeloid leukocyte | 2.57e-07 | 72 |
classical monocyte | 2.96e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.96e-07 | 42 |
myeloid lineage restricted progenitor cell | 6.13e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.36e-12 | 98 |
blood island | 3.36e-12 | 98 |
hemolymphoid system | 1.26e-10 | 108 |
immune system | 4.29e-09 | 93 |
lateral plate mesoderm | 3.16e-08 | 203 |
bone marrow | 6.40e-08 | 76 |
bone element | 4.06e-07 | 82 |