FFCP PHASE1:Hg19::chr10:17659357..17659401,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:17659357..17659401,-
|short_description=p2@PTPLA
|description=CAGE_peak_2_at_PTPLA_5end
|association_with_transcript=0bp_to_ENST00000326961,ENST0000036127...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9200 | |EntrezGene=9200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9639 | |HGNC=9639 | ||
|UniProt=A6NP58, | |TSSclassifier=strong | ||
|UniProt=A6NP58,B0YJ81 | |||
|association_with_transcript=0bp_to_ENST00000326961,ENST00000361271,NM_014241,uc001ipg.2,uc001iph.1,uc001ipi.2_5end | |||
|cluster_id=chr10:17659357..17659401,- | |||
|coexpression_cluster_id=C3003 | |||
|description=CAGE_peak_2_at_PTPLA_5end | |||
|id=chr10:17659357..17659401,- | |||
|ontology_enrichment_celltype=CL:0000055!2.66e-20!180;CL:0000220!3.28e-15!246;CL:0002321!5.45e-15!248;CL:0000057!3.28e-12!75;CL:0000066!7.33e-12!254;CL:0000222!5.43e-09!119;CL:0000012!4.88e-07!682;CL:0000548!6.02e-07!679;CL:0000004!6.02e-07!679;CL:0000255!6.02e-07!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.54e-15,250;CL:0000057,1.26e-12,76;CL:0000066,7.51e-12,253;CL:0000222,4.19e-09,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.21e-13!216;UBERON:0000475!8.59e-13!365;UBERON:0005256!3.40e-12!143;UBERON:0003104!3.85e-12!238;UBERON:0009142!3.85e-12!238;UBERON:0000481!2.18e-11!347;UBERON:0000914!1.31e-09!83;UBERON:0002329!1.31e-09!83;UBERON:0003077!1.31e-09!83;UBERON:0003059!1.31e-09!83;UBERON:0007282!1.31e-09!83;UBERON:0009618!1.31e-09!83;UBERON:0007285!1.31e-09!83;UBERON:0000486!6.31e-09!82;UBERON:0003102!1.02e-08!95;UBERON:0000468!1.95e-08!659;UBERON:0004290!2.00e-08!70;UBERON:0000119!1.92e-07!312;UBERON:0000483!2.25e-07!309;UBERON:0002385!2.99e-07!63;UBERON:0001015!2.99e-07!63;UBERON:0000383!2.99e-07!63;UBERON:0001134!3.87e-07!61;UBERON:0002036!3.87e-07!61;UBERON:0003082!3.87e-07!61;UBERON:0001444!5.57e-07!48 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.94e-12,199;UBERON:0003104,5.41e-11,160;UBERON:0009142,5.41e-11,160;UBERON:0007503,6.59e-10,78;UBERON:0005256,9.27e-10,122;UBERON:0003102,2.41e-09,99;UBERON:0000486,5.40e-09,83;UBERON:0002329,1.52e-08,71;UBERON:0003059,1.52e-08,71;UBERON:0007282,1.52e-08,71;UBERON:0004290,1.52e-08,71;UBERON:0009618,1.52e-08,71;UBERON:0007524,2.01e-08,73;UBERON:0003077,3.60e-08,72;UBERON:0007285,3.60e-08,72;UBERON:0000119,1.67e-07,309;UBERON:0000483,1.96e-07,306;UBERON:0002385,2.31e-07,64;UBERON:0001015,2.31e-07,64;UBERON:0000383,2.31e-07,64;UBERON:0001134,2.99e-07,62;UBERON:0002036,2.99e-07,62;UBERON:0003082,2.99e-07,62;UBERON:0000490,3.08e-07,148;UBERON:0001048,5.13e-07,160;UBERON:0001444,6.86e-07,49 | |||
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| ||
|short_description=p2@PTPLA | |||
}} | }} |
Latest revision as of 11:27, 17 September 2015
Short description: | p2@PTPLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPLA_5end |
Coexpression cluster: | C3003_mesothelioma_heart_basal_Fibroblast_Melanocyte_Mesenchymal_Retinal |
Association with transcript: | 0bp_to_ENST00000326961, ENST00000361271, NM_014241, uc001ipg.2, uc001iph.1, uc001ipi.2_5end |
EntrezGene: | PTPLA |
HGNC: | 9639 |
UniProt: | A6NP58B0YJ81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.54e-15 | 250 |
fibroblast | 1.26e-12 | 76 |
epithelial cell | 7.51e-12 | 253 |
mesodermal cell | 4.19e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.94e-12 | 199 |
mesenchyme | 5.41e-11 | 160 |
entire embryonic mesenchyme | 5.41e-11 | 160 |
epithelial vesicle | 6.59e-10 | 78 |
trunk mesenchyme | 9.27e-10 | 122 |
surface structure | 2.41e-09 | 99 |
multilaminar epithelium | 5.40e-09 | 83 |
somite | 1.52e-08 | 71 |
presomitic mesoderm | 1.52e-08 | 71 |
presumptive segmental plate | 1.52e-08 | 71 |
dermomyotome | 1.52e-08 | 71 |
trunk paraxial mesoderm | 1.52e-08 | 71 |
dense mesenchyme tissue | 2.01e-08 | 73 |
paraxial mesoderm | 3.60e-08 | 72 |
presumptive paraxial mesoderm | 3.60e-08 | 72 |
cell layer | 1.67e-07 | 309 |
epithelium | 1.96e-07 | 306 |
muscle tissue | 2.31e-07 | 64 |
musculature | 2.31e-07 | 64 |
musculature of body | 2.31e-07 | 64 |
skeletal muscle tissue | 2.99e-07 | 62 |
striated muscle tissue | 2.99e-07 | 62 |
myotome | 2.99e-07 | 62 |
unilaminar epithelium | 3.08e-07 | 148 |
primordium | 5.13e-07 | 160 |
subdivision of head | 6.86e-07 | 49 |