FFCP PHASE2:Hg19::chr1:155224711..155224738,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10712 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1233 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1233 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=D6RD59 | ||
|association_with_transcript=12bp_to_,-12bp_to_ENST00000350210,ENST00000491082_5end | |association_with_transcript=12bp_to_,-12bp_to_ENST00000350210,ENST00000491082_5end | ||
|cluster_id=chr1:155224711..155224738,- | |cluster_id=chr1:155224711..155224738,- | ||
Latest revision as of 12:02, 17 September 2015
| Short description: | p6@FAM189B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_FAM189B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 12bp_to_, -12bp_to_ENST00000350210, ENST00000491082_5end |
| EntrezGene: | FAM189B |
| HGNC: | 1233 |
| UniProt: | D6RD59 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p6@FAM189B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 4.82e-16 | 76 |
| muscle precursor cell | 1.52e-07 | 58 |
| myoblast | 1.52e-07 | 58 |
| multi-potent skeletal muscle stem cell | 1.52e-07 | 58 |
| fibroblast of tunica adventitia of artery | 2.41e-07 | 4 |
| fibroblast of the aortic adventitia | 2.41e-07 | 4 |
| preadipocyte | 2.88e-07 | 12 |
| fibroblast of gingiva | 4.06e-07 | 5 |
| visceral preadipocyte | 4.24e-07 | 3 |
| multi fate stem cell | 5.09e-07 | 427 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 3.38e-13 | 78 |
| dense mesenchyme tissue | 3.77e-11 | 73 |
| somite | 1.11e-10 | 71 |
| presomitic mesoderm | 1.11e-10 | 71 |
| presumptive segmental plate | 1.11e-10 | 71 |
| dermomyotome | 1.11e-10 | 71 |
| trunk paraxial mesoderm | 1.11e-10 | 71 |
| paraxial mesoderm | 1.94e-10 | 72 |
| presumptive paraxial mesoderm | 1.94e-10 | 72 |
| surface structure | 2.73e-10 | 99 |
Showing 1 to 10 of 36 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 3.32e-07 | 3 |
| leiomyoma | 3.32e-07 | 3 |
Showing 1 to 2 of 2 entries
