FFCP PHASE1:Hg19::chr1:155232007..155232046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10067 | |EntrezGene=10067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10565 | |HGNC=10565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465312_5end | |association_with_transcript=0bp_to_ENST00000465312_5end | ||
|cluster_id=chr1:155232007..155232046,- | |||
|description=CAGE_peak_2_at_SCAMP3_5end | |description=CAGE_peak_2_at_SCAMP3_5end | ||
|id=chr1:155232007..155232046,- | |id=chr1:155232007..155232046,- | ||
|ontology_enrichment_celltype=CL:0000055!1.25e-23!180;CL:0000222!8.16e-20!119;CL:0000220!4.10e-18!246;CL:0002321!2.15e-17!248;CL:0000183!1.48e-13!59;CL:0000192!3.20e-12!42;CL:0000514!3.20e-12!42;CL:0000680!6.37e-12!57;CL:0000056!6.37e-12!57;CL:0000355!6.37e-12!57;CL:0000187!3.41e-11!54;CL:0000359!9.51e-10!32;CL:0000548!9.71e-10!679;CL:0000004!9.71e-10!679;CL:0000255!9.71e-10!679;CL:0000393!3.17e-09!60;CL:0000211!3.17e-09!60;CL:0000066!3.68e-09!254;CL:0000012!6.89e-09!682;CL:0000057!1.21e-07!75;CL:0000213!1.44e-07!57;CL:0000215!1.44e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.25e-23!180;CL:0000222!8.16e-20!119;CL:0000220!4.10e-18!246;CL:0002321!2.15e-17!248;CL:0000183!1.48e-13!59;CL:0000192!3.20e-12!42;CL:0000514!3.20e-12!42;CL:0000680!6.37e-12!57;CL:0000056!6.37e-12!57;CL:0000355!6.37e-12!57;CL:0000187!3.41e-11!54;CL:0000359!9.51e-10!32;CL:0000548!9.71e-10!679;CL:0000004!9.71e-10!679;CL:0000255!9.71e-10!679;CL:0000393!3.17e-09!60;CL:0000211!3.17e-09!60;CL:0000066!3.68e-09!254;CL:0000012!6.89e-09!682;CL:0000057!1.21e-07!75;CL:0000213!1.44e-07!57;CL:0000215!1.44e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.19e-09;32!CL:0000192;2.61e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.40e-20,121;CL:0002321,7.10e-18,250;CL:0000192,2.38e-12,43;CL:0000514,2.38e-12,43;CL:0000680,4.55e-12,58;CL:0000056,4.55e-12,58;CL:0000355,4.55e-12,58;CL:0000187,2.44e-11,55;CL:0000359,9.51e-10,32;CL:0000393,2.26e-09,61;CL:0000211,2.26e-09,61;CL:0000066,4.94e-09,253;CL:0000057,6.75e-08,76;CL:0000213,7.25e-08,58;CL:0000215,7.25e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.61e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.89e-16!216;UBERON:0000475!3.22e-15!365;UBERON:0003914!3.53e-15!118;UBERON:0000119!9.86e-15!312;UBERON:0000477!1.61e-14!286;UBERON:0005256!2.09e-14!143;UBERON:0000481!4.54e-14!347;UBERON:0000483!5.82e-14!309;UBERON:0003104!1.97e-13!238;UBERON:0009142!1.97e-13!238;UBERON:0000914!9.12e-13!83;UBERON:0002329!9.12e-13!83;UBERON:0003077!9.12e-13!83;UBERON:0003059!9.12e-13!83;UBERON:0007282!9.12e-13!83;UBERON:0009618!9.12e-13!83;UBERON:0007285!9.12e-13!83;UBERON:0002049!2.07e-12!79;UBERON:0007798!2.07e-12!79;UBERON:0004290!4.59e-12!70;UBERON:0000490!9.32e-12!138;UBERON:0001134!1.10e-11!61;UBERON:0002036!1.10e-11!61;UBERON:0003082!1.10e-11!61;UBERON:0004111!1.20e-11!241;UBERON:0000055!1.59e-11!69;UBERON:0000486!1.68e-11!82;UBERON:0000025!2.65e-11!194;UBERON:0004872!4.45e-11!84;UBERON:0002385!7.14e-11!63;UBERON:0001015!7.14e-11!63;UBERON:0000383!7.14e-11!63;UBERON:0001981!1.62e-09!60;UBERON:0007500!1.62e-09!60;UBERON:0004537!1.62e-09!60;UBERON:0006965!1.62e-09!60;UBERON:0001637!1.73e-09!42;UBERON:0003509!1.73e-09!42;UBERON:0004572!1.73e-09!42;UBERON:0001009!4.84e-09!113;UBERON:0009569!8.81e-09!113;UBERON:0004535!2.28e-08!110;UBERON:0000480!3.80e-08!626;UBERON:0000468!4.21e-08!659;UBERON:0000467!7.86e-08!625;UBERON:0004573!1.93e-07!33;UBERON:0004571!1.93e-07!33;UBERON:0003103!4.03e-07!69;UBERON:0001737!4.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.06e-07;42!UBERON:0003509;4.06e-07;42!UBERON:0004572;4.06e-07;42!UBERON:0001737;4.70e-07;9!UBERON:0001557;4.70e-07;9!UBERON:0004573;9.10e-07;33!UBERON:0004571;9.10e-07;33!UBERON:0003914;9.12e-07;74 | |||
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| ||
|short_description=p2@SCAMP3 | |short_description=p2@SCAMP3 | ||
}} | }} |
Latest revision as of 12:10, 17 September 2015
Short description: | p2@SCAMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCAMP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465312_5end |
EntrezGene: | SCAMP3 |
HGNC: | 10565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.40e-20 | 121 |
embryonic cell | 7.10e-18 | 250 |
smooth muscle cell | 2.38e-12 | 43 |
smooth muscle myoblast | 2.38e-12 | 43 |
muscle precursor cell | 4.55e-12 | 58 |
myoblast | 4.55e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.55e-12 | 58 |
muscle cell | 2.44e-11 | 55 |
vascular associated smooth muscle cell | 9.51e-10 | 32 |
electrically responsive cell | 2.26e-09 | 61 |
electrically active cell | 2.26e-09 | 61 |
epithelial cell | 4.94e-09 | 253 |
fibroblast | 6.75e-08 | 76 |
lining cell | 7.25e-08 | 58 |
barrier cell | 7.25e-08 | 58 |