FFCP PHASE1:Hg19::chr15:40643227..40643240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644844 | |EntrezGene=644844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37226 | |HGNC=37226 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFL3,F5H1R0 | |UniProt=C9JFL3,F5H1R0 | ||
|association_with_transcript=0bp_to_ENST00000448599,ENST00000535816,ENST00000560745,NM_001145643,uc010uco.1_5end | |association_with_transcript=0bp_to_ENST00000448599,ENST00000535816,ENST00000560745,NM_001145643,uc010uco.1_5end | ||
|cluster_id=chr15:40643227..40643240,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_PHGR1_5end | |description=CAGE_peak_1_at_PHGR1_5end | ||
|id=chr15:40643227..40643240,+ | |id=chr15:40643227..40643240,+ | ||
|ontology_enrichment_celltype=CL:0000244!6.02e-13!4;CL:0000731!6.02e-13!4 | |ontology_enrichment_celltype=CL:0000244!6.02e-13!4;CL:0000731!6.02e-13!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.22e-11;4!CL:0000731;2.22e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.57e-11,4;CL:0000731,2.57e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0006595;9.25e-07;86!UBERON:0001045;9.29e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;6.51e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.08e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.33e-20!169;UBERON:0000925!8.33e-20!169;UBERON:0006595!8.33e-20!169;UBERON:0004921!6.22e-18!129;UBERON:0004185!6.22e-18!129;UBERON:0001007!3.97e-17!155;UBERON:0001555!3.97e-17!155;UBERON:0007026!3.97e-17!155;UBERON:0005409!4.78e-16!35;UBERON:0000160!9.77e-16!27;UBERON:0000059!3.38e-15!11;UBERON:0004907!1.21e-11!5;UBERON:0000077!2.86e-11!130;UBERON:0005911!1.26e-10!82;UBERON:0000365!2.26e-10!5;UBERON:0001046!4.76e-10!19;UBERON:0001155!6.05e-10!9;UBERON:0005910!1.19e-08!6;UBERON:0001052!1.58e-08!4;UBERON:0002294!1.62e-07!7;UBERON:0001173!1.62e-07!7;UBERON:0004912!1.62e-07!7;UBERON:0007023!4.03e-07!115 | |ontology_enrichment_uberon=UBERON:0004119!8.33e-20!169;UBERON:0000925!8.33e-20!169;UBERON:0006595!8.33e-20!169;UBERON:0004921!6.22e-18!129;UBERON:0004185!6.22e-18!129;UBERON:0001007!3.97e-17!155;UBERON:0001555!3.97e-17!155;UBERON:0007026!3.97e-17!155;UBERON:0005409!4.78e-16!35;UBERON:0000160!9.77e-16!27;UBERON:0000059!3.38e-15!11;UBERON:0004907!1.21e-11!5;UBERON:0000077!2.86e-11!130;UBERON:0005911!1.26e-10!82;UBERON:0000365!2.26e-10!5;UBERON:0001046!4.76e-10!19;UBERON:0001155!6.05e-10!9;UBERON:0005910!1.19e-08!6;UBERON:0001052!1.58e-08!4;UBERON:0002294!1.62e-07!7;UBERON:0001173!1.62e-07!7;UBERON:0004912!1.62e-07!7;UBERON:0007023!4.03e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.04e-42;22!UBERON:0000160;5.53e-40;17!UBERON:0004921;3.50e-32;33!UBERON:0000059;5.71e-23;11!UBERON:0004907;4.12e-17;5!UBERON:0002108;4.47e-17;4!UBERON:0001155;7.01e-15;9!UBERON:0001052;2.35e-12;4!UBERON:0001555;4.62e-12;54!UBERON:0000365;3.34e-09;5!UBERON:0001007;7.13e-09;81!UBERON:0005910;9.55e-08;6!UBERON:0002114;1.06e-07;2!UBERON:0002110;1.50e-07;3!UBERON:0005911;5.41e-07;36!UBERON:0002294;7.71e-07;7!UBERON:0001173;7.71e-07;7!UBERON:0001154;9.29e-07;1!UBERON:0001153;9.29e-07;1!UBERON:0009854;9.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.84e-40,17;UBERON:0005409,8.59e-37,25;UBERON:0000059,5.72e-23,11;UBERON:0004119,1.28e-18,160;UBERON:0000925,1.28e-18,160;UBERON:0006595,1.28e-18,160;UBERON:0004921,1.35e-17,118;UBERON:0002108,3.80e-17,4;UBERON:0004907,4.13e-17,5;UBERON:0001007,2.67e-16,145;UBERON:0001555,2.67e-16,145;UBERON:0007026,2.67e-16,145;UBERON:0001155,7.02e-15,9;UBERON:0001052,2.35e-12,4;UBERON:0001046,3.27e-09,19;UBERON:0000365,3.75e-09,5;UBERON:0002114,9.23e-08,2;UBERON:0005910,1.05e-07,6;UBERON:0011216,1.07e-07,223;UBERON:0005911,1.55e-07,82;UBERON:0002110,1.63e-07,3;UBERON:0006242,1.63e-07,3;UBERON:0001154,9.30e-07,1;UBERON:0001153,9.30e-07,1;UBERON:0001045,9.30e-07,1 | |||
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| ||
|short_description=p1@PHGR1 | |short_description=p1@PHGR1 | ||
}} | }} |
Latest revision as of 13:09, 17 September 2015
Short description: | p1@PHGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHGR1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000448599, ENST00000535816, ENST00000560745, NM_001145643, uc010uco.1_5end |
EntrezGene: | PHGR1 |
HGNC: | 37226 |
UniProt: | C9JFL3F5H1R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.57e-11 | 4 |
urothelial cell | 2.57e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.84e-40 | 17 |
gastrointestinal system | 8.59e-37 | 25 |
large intestine | 5.72e-23 | 11 |
endoderm-derived structure | 1.28e-18 | 160 |
endoderm | 1.28e-18 | 160 |
presumptive endoderm | 1.28e-18 | 160 |
subdivision of digestive tract | 1.35e-17 | 118 |
small intestine | 3.80e-17 | 4 |
lower digestive tract | 4.13e-17 | 5 |
digestive system | 2.67e-16 | 145 |
digestive tract | 2.67e-16 | 145 |
primitive gut | 2.67e-16 | 145 |
colon | 7.02e-15 | 9 |
rectum | 2.35e-12 | 4 |
hindgut | 3.27e-09 | 19 |
urothelium | 3.75e-09 | 5 |
duodenum | 9.23e-08 | 2 |
transitional epithelium | 1.05e-07 | 6 |
organ system subdivision | 1.07e-07 | 223 |
endo-epithelium | 1.55e-07 | 82 |
gallbladder | 1.63e-07 | 3 |
gall bladder primordium | 1.63e-07 | 3 |
vermiform appendix | 9.30e-07 | 1 |
caecum | 9.30e-07 | 1 |
midgut | 9.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.08e-09 | 14 |