FFCP PHASE1:Hg19::chr11:31832539..31832548,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:31832539..31832548,-
|short_description=p16@PAX6
|description=CAGE_peak_16_at_PAX6_5end
|association_with_transcript=44bp_to_ENST00000379111,uc001mte.3_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=44bp_to_ENST00000379111,uc001mte.3_5end | |||
|cluster_id=chr11:31832539..31832548,- | |||
|description=CAGE_peak_16_at_PAX6_5end | |||
|id=chr11:31832539..31832548,- | |||
|ontology_enrichment_celltype=CL:0000064!1.13e-09!3;CL:0005012!1.13e-09!3;CL:0000067!1.13e-09!3;CL:0002304!1.13e-09!3;CL:0000075!9.41e-07!27 | |||
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|ontology_enrichment_celltype_v019_2=CL:0000064,1.67e-45,3;CL:0000067,1.67e-45,3;CL:0005012,1.67e-45,3;CL:0002304,1.67e-45,3;CL:0000075,2.87e-09,27;CL:0002535,4.34e-09,2;CL:0000710,2.21e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p16@PAX6 | |||
}} | }} |
Latest revision as of 14:55, 17 September 2015
Short description: | p16@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.67e-45 | 3 |
ciliated epithelial cell | 1.67e-45 | 3 |
multi-ciliated epithelial cell | 1.67e-45 | 3 |
non-pigmented ciliary epithelial cell | 1.67e-45 | 3 |
columnar/cuboidal epithelial cell | 2.87e-09 | 27 |
epithelial cell of cervix | 4.34e-09 | 2 |
neurecto-epithelial cell | 2.21e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.67e-45 | 3 |
ciliary body | 1.67e-45 | 3 |
atypical epithelium | 2.40e-34 | 4 |
vasculature of eye | 3.64e-23 | 6 |
uvea | 3.64e-23 | 6 |
vasculature of head | 3.64e-23 | 6 |
pigment epithelium of eye | 2.92e-22 | 11 |
anterior segment of eyeball | 1.40e-17 | 14 |
umbilical cord | 1.94e-14 | 10 |
blastocyst | 1.94e-14 | 10 |
blastula | 1.94e-14 | 10 |
bilaminar disc | 1.94e-14 | 10 |
inner cell mass | 1.94e-14 | 10 |
cleaving embryo | 1.94e-14 | 10 |
connecting stalk | 1.94e-14 | 10 |
inner cell mass derived epiblast | 1.94e-14 | 10 |
extraembryonic mesoderm | 1.94e-14 | 10 |
vasculature of organ | 5.96e-13 | 11 |
camera-type eye | 2.07e-12 | 20 |
simple eye | 2.07e-12 | 20 |
immature eye | 2.07e-12 | 20 |
ocular region | 2.07e-12 | 20 |
eyeball of camera-type eye | 2.07e-12 | 20 |
optic cup | 2.07e-12 | 20 |
optic vesicle | 2.07e-12 | 20 |
eye primordium | 2.07e-12 | 20 |
eye | 7.79e-12 | 21 |
visual system | 7.79e-12 | 21 |
face | 2.60e-11 | 22 |
sense organ | 2.16e-10 | 24 |
sensory system | 2.16e-10 | 24 |
entire sense organ system | 2.16e-10 | 24 |
blood | 7.90e-10 | 15 |
haemolymphatic fluid | 7.90e-10 | 15 |
organism substance | 7.90e-10 | 15 |
uterine epithelium | 4.34e-09 | 2 |
cervix epithelium | 4.34e-09 | 2 |
ectodermal placode | 4.18e-08 | 31 |