FFCP PHASE1:Hg19::chr13:48806893..48806897,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9445 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6174 | |||
|TSSclassifier=strong | |||
|UniProt=Q5W0A3,Q9Y287 | |||
|association_with_transcript=-376bp_to_NM_021999,uc001vbz.3_5end | |||
|cluster_id=chr13:48806893..48806897,+ | |||
|description=CAGE_peak_10_at_ITM2B_5end | |||
|id=chr13:48806893..48806897,+ | |||
|ontology_enrichment_celltype=CL:0002541!9.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.52e-22;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.47e-22,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.53e-16;1!UBERON:0008814;6.17e-09;2!UBERON:0010056;6.17e-09;2!UBERON:0006965;6.17e-09;2!UBERON:0007297;6.17e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.52e-17;1!DOID:3149;5.52e-17;1!DOID:3451;3.71e-09;2!DOID:4159;3.71e-09;2!DOID:0060122;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.72e-17,1;DOID:3149,4.72e-17,1;DOID:3451,3.43e-09,2;DOID:4159,3.43e-09,2;DOID:0060122,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-32!115;UBERON:0003135!5.36e-09!11;UBERON:0006947!5.38e-08!3;UBERON:0004054!5.38e-08!3;UBERON:0000476!9.78e-08!3;UBERON:0000920!9.78e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.52e-22;3!UBERON:0000920;8.52e-22;3!UBERON:0006947;3.27e-21;3!UBERON:0004054;3.27e-21;3!UBERON:0001000;1.53e-16;1!UBERON:0001301;1.53e-16;1!UBERON:0005352;1.53e-16;1!UBERON:0005904;3.58e-16;4!UBERON:0005631;3.44e-07;10!UBERON:0000158;3.44e-07;10!UBERON:0004175;4.10e-07;21!UBERON:0000058;5.11e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.47e-22,3;UBERON:0006947,2.41e-21,3;UBERON:0004054,2.41e-21,3;UBERON:0001301,8.86e-17,1;UBERON:0001000,1.65e-16,1;UBERON:0005352,1.65e-16,1;UBERON:0005904,2.85e-16,4;UBERON:0007023,5.41e-10,114;UBERON:0003124,7.00e-10,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0.764637207142375,0,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.774054819518572,0.591095237907095,0.219385397153973,0,0.697118721393016,1.61595542857974,0,0,0,0,2.23300811812344,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,1.99052386215701,0.619202951523374,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.92199335066233,0,0,0,0,1.16386819786103,0,0.225980740780532,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,2.34804281319486,1.49730843868477,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.177404740325278,0,0,0,0.131545547125698,0,0,0.78493092850514,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.757786982182394,0.535928260312357,0,0,0.426467963801962,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,1.08858373948481,0,0.471464371102113,0.430333232356058,0,0,0,0,0,0,0.488965776731466,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p10@ITM2B | |||
}} |
Latest revision as of 14:57, 17 September 2015
Short description: | p10@ITM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -376bp_to_NM_021999, uc001vbz.3_5end |
EntrezGene: | ITM2B |
HGNC: | 6174 |
UniProt: | Q5W0A3Q9Y287 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.47e-22 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.47e-22 | 3 |
male genital duct | 2.41e-21 | 3 |
internal male genitalia | 2.41e-21 | 3 |
epididymis | 8.86e-17 | 1 |
vas deferens | 1.65e-16 | 1 |
spermatic cord | 1.65e-16 | 1 |
duct of male reproductive system | 2.85e-16 | 4 |
adult organism | 5.41e-10 | 114 |
chorion | 7.00e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.72e-17 | 1 |
keratoacanthoma | 4.72e-17 | 1 |
skin carcinoma | 3.43e-09 | 2 |
skin cancer | 3.43e-09 | 2 |
integumentary system cancer | 3.43e-09 | 2 |