FFCP PHASE1:Hg19::chr9:6757183..6757204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCN1,F5H347,B4E239,Q9H3R0,B4E1Y4,B4E142,B7Z3V6 | |UniProt=F8WCN1,F5H347,B4E239,Q9H3R0,B4E1Y4,B4E142,B7Z3V6 | ||
|association_with_transcript=-436bp_to_ENST00000438023,ENST00000543771,NM_001146694,NM_001146695,NM_015061,uc003zkg.2,uc003zkh.2,uc010mhv.2,uc010mhw.2,uc011lmi.1,uc011lmj.1,uc011lmk.1_5end | |association_with_transcript=-436bp_to_ENST00000438023,ENST00000543771,NM_001146694,NM_001146695,NM_015061,uc003zkg.2,uc003zkh.2,uc010mhv.2,uc010mhw.2,uc011lmi.1,uc011lmj.1,uc011lmk.1_5end | ||
|cluster_id=chr9:6757183..6757204,+ | |||
|coexpression_cluster_id=C871 | |coexpression_cluster_id=C871 | ||
|description=CAGE_peak_9_at_KDM4C_5end | |description=CAGE_peak_9_at_KDM4C_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.73e-54!172;CL:0000566!1.73e-54!172;CL:0000738!2.57e-51!140;CL:0000988!1.76e-50!182;CL:0002032!2.09e-49!165;CL:0000837!2.09e-49!165;CL:0002031!3.24e-44!124;CL:0002087!3.87e-42!119;CL:0000838!6.10e-26!52;CL:0000542!1.05e-25!53;CL:0000051!1.05e-25!53;CL:0000763!4.26e-23!112;CL:0000049!4.26e-23!112;CL:0000766!3.15e-19!76;CL:0000557!3.24e-18!71;CL:0000839!1.83e-17!70;CL:0002057!6.42e-17!42;CL:0000860!6.53e-16!45;CL:0002009!8.11e-16!65;CL:0002194!5.48e-15!63;CL:0000576!5.48e-15!63;CL:0000040!5.48e-15!63;CL:0000559!5.48e-15!63;CL:0000945!3.12e-14!24;CL:0000826!3.12e-14!24;CL:0000134!1.21e-11!358;CL:0000236!4.49e-11!14;CL:0000084!6.36e-11!25;CL:0000827!6.36e-11!25;CL:0002320!1.69e-10!365;CL:0000219!6.20e-10!390;CL:0000791!6.91e-09!18;CL:0000789!6.91e-09!18;CL:0002420!6.91e-09!18;CL:0002419!6.91e-09!18;CL:0000790!6.91e-09!18 | |ontology_enrichment_celltype=CL:0000037!1.73e-54!172;CL:0000566!1.73e-54!172;CL:0000738!2.57e-51!140;CL:0000988!1.76e-50!182;CL:0002032!2.09e-49!165;CL:0000837!2.09e-49!165;CL:0002031!3.24e-44!124;CL:0002087!3.87e-42!119;CL:0000838!6.10e-26!52;CL:0000542!1.05e-25!53;CL:0000051!1.05e-25!53;CL:0000763!4.26e-23!112;CL:0000049!4.26e-23!112;CL:0000766!3.15e-19!76;CL:0000557!3.24e-18!71;CL:0000839!1.83e-17!70;CL:0002057!6.42e-17!42;CL:0000860!6.53e-16!45;CL:0002009!8.11e-16!65;CL:0002194!5.48e-15!63;CL:0000576!5.48e-15!63;CL:0000040!5.48e-15!63;CL:0000559!5.48e-15!63;CL:0000945!3.12e-14!24;CL:0000826!3.12e-14!24;CL:0000134!1.21e-11!358;CL:0000236!4.49e-11!14;CL:0000084!6.36e-11!25;CL:0000827!6.36e-11!25;CL:0002320!1.69e-10!365;CL:0000219!6.20e-10!390;CL:0000791!6.91e-09!18;CL:0000789!6.91e-09!18;CL:0002420!6.91e-09!18;CL:0002419!6.91e-09!18;CL:0000790!6.91e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.53e-27;53!CL:0000945;4.36e-27;24!CL:0000236;7.17e-21;13!CL:0000791;2.36e-17;18!CL:0000789;2.36e-17;18!CL:0002419;2.36e-17;18!CL:0000084;1.91e-16;25!CL:0002087;7.14e-16;104!CL:0000738;1.52e-13;136!CL:0000624;5.48e-11;6!CL:0000625;7.47e-10;11!CL:0000988;1.20e-09;177!CL:0002393;1.60e-08;6!CL:0002397;1.60e-08;6!CL:0000766;1.93e-08;69!CL:0000576;2.84e-08;48!CL:0000860;1.35e-07;33!CL:0002057;1.35e-07;33!CL:0000473;2.23e-07;39!CL:0000234;2.23e-07;39!CL:0000219;9.75e-07;193 | |ontology_enrichment_celltype_v019=CL:0000542;3.53e-27;53!CL:0000945;4.36e-27;24!CL:0000236;7.17e-21;13!CL:0000791;2.36e-17;18!CL:0000789;2.36e-17;18!CL:0002419;2.36e-17;18!CL:0000084;1.91e-16;25!CL:0002087;7.14e-16;104!CL:0000738;1.52e-13;136!CL:0000624;5.48e-11;6!CL:0000625;7.47e-10;11!CL:0000988;1.20e-09;177!CL:0002393;1.60e-08;6!CL:0002397;1.60e-08;6!CL:0000766;1.93e-08;69!CL:0000576;2.84e-08;48!CL:0000860;1.35e-07;33!CL:0002057;1.35e-07;33!CL:0000473;2.23e-07;39!CL:0000234;2.23e-07;39!CL:0000219;9.75e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.31e-69,136;CL:0000037,7.56e-63,168;CL:0000988,1.38e-59,177;CL:0002087,2.33e-59,115;CL:0002031,9.96e-59,120;CL:0002032,3.64e-54,161;CL:0000837,3.64e-54,161;CL:0000838,8.49e-47,52;CL:0000542,1.26e-45,53;CL:0000051,1.26e-45,53;CL:0000945,1.68e-27,24;CL:0000826,1.68e-27,24;CL:0000236,6.36e-22,14;CL:0000766,1.99e-19,72;CL:0000791,2.24e-17,18;CL:0000789,2.24e-17,18;CL:0002420,2.24e-17,18;CL:0002419,2.24e-17,18;CL:0000790,2.24e-17,18;CL:0000473,8.19e-17,48;CL:0000234,8.19e-17,48;CL:0000557,8.43e-17,67;CL:0000084,1.77e-16,25;CL:0000827,1.77e-16,25;CL:0000860,4.29e-16,42;CL:0002057,4.29e-16,42;CL:0000134,5.34e-16,354;CL:0000763,6.92e-16,108;CL:0000049,6.92e-16,108;CL:0000839,8.95e-16,66;CL:0002320,3.45e-15,361;CL:0002009,1.63e-14,61;CL:0002194,5.00e-14,59;CL:0000576,5.00e-14,59;CL:0000040,5.00e-14,59;CL:0000559,5.00e-14,59;CL:0000219,2.26e-12,386;CL:0002393,1.29e-11,9;CL:0002397,1.29e-11,9;CL:0000624,5.15e-11,6;CL:0000625,7.41e-10,11;CL:0000034,9.06e-10,441;CL:0000048,4.86e-09,427;CL:0000723,1.36e-08,433 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-27;53!CL:0000790;2.36e-17;18!CL:0002057;1.19e-11;42 | |ontology_enrichment_development_v019=CL:0000051;3.53e-27;53!CL:0000790;2.36e-17;18!CL:0002057;1.19e-11;42 | ||
|ontology_enrichment_disease=DOID:2531!7.12e-08!51;DOID:0060083!7.12e-08!51 | |ontology_enrichment_disease=DOID:2531!7.12e-08!51;DOID:0060083!7.12e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.25e-23!102;UBERON:0003061!3.25e-23!102;UBERON:0002193!5.29e-21!112;UBERON:0002371!3.35e-15!80;UBERON:0002405!1.20e-13!115;UBERON:0001474!2.93e-13!86;UBERON:0002384!1.47e-09!375;UBERON:0004765!4.38e-08!101;UBERON:0001434!4.38e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!3.25e-23!102;UBERON:0003061!3.25e-23!102;UBERON:0002193!5.29e-21!112;UBERON:0002371!3.35e-15!80;UBERON:0002405!1.20e-13!115;UBERON:0001474!2.93e-13!86;UBERON:0002384!1.47e-09!375;UBERON:0004765!4.38e-08!101;UBERON:0001434!4.38e-08!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p9@KDM4C | |short_description=p9@KDM4C | ||
}} | }} |
Latest revision as of 15:13, 17 September 2015
Short description: | p9@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KDM4C_5end |
Coexpression cluster: | C871_CD19_Mast_CD4_CD8_Natural_Peripheral_Basophils |
Association with transcript: | -436bp_to_ENST00000438023, ENST00000543771, NM_001146694, NM_001146695, NM_015061, uc003zkg.2, uc003zkh.2, uc010mhv.2, uc010mhw.2, uc011lmi.1, uc011lmj.1, uc011lmk.1_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | F8WCN1F5H347B4E239Q9H3R0B4E1Y4B4E142B7Z3V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-23 | 98 |
blood island | 1.52e-23 | 98 |
hemolymphoid system | 2.89e-22 | 108 |
immune system | 3.79e-17 | 93 |
bone marrow | 1.01e-14 | 76 |
connective tissue | 4.33e-14 | 371 |
bone element | 6.48e-13 | 82 |
skeletal element | 6.56e-11 | 90 |
skeletal system | 6.74e-09 | 100 |