FFCP PHASE1:Hg19::chr13:48987228..48987239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10161 | |EntrezGene=10161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15520 | |HGNC=15520 | ||
|TSSclassifier=strong | |||
|UniProt=B3KVQ5,F2YGU4,P43657 | |UniProt=B3KVQ5,F2YGU4,P43657 | ||
|association_with_transcript=413bp_to_NM_001162498,uc010acu.2_5end | |association_with_transcript=413bp_to_NM_001162498,uc010acu.2_5end | ||
|cluster_id=chr13:48987228..48987239,- | |||
|coexpression_cluster_id=C3377 | |||
|description=CAGE_peak_2_at_LPAR6_5end | |description=CAGE_peak_2_at_LPAR6_5end | ||
|id=chr13:48987228..48987239,- | |id=chr13:48987228..48987239,- | ||
|ontology_enrichment_celltype=CL:0002057!1.21e-20!42;CL:0002009!3.80e-19!65;CL:0002194!3.51e-18!63;CL:0000576!3.51e-18!63;CL:0000040!3.51e-18!63;CL:0000559!3.51e-18!63;CL:0000860!1.70e-17!45;CL:0000557!2.20e-16!71;CL:0002087!3.01e-15!119;CL:0000839!7.92e-15!70;CL:0000766!2.33e-14!76;CL:0000738!3.87e-14!140;CL:0002031!1.68e-13!124;CL:0000791!9.68e-10!18;CL:0000789!9.68e-10!18;CL:0002420!9.68e-10!18;CL:0002419!9.68e-10!18;CL:0000790!9.68e-10!18;CL:0000037!1.95e-09!172;CL:0000566!1.95e-09!172;CL:0000763!8.43e-09!112;CL:0000049!8.43e-09!112;CL:0002032!9.24e-09!165;CL:0000837!9.24e-09!165;CL:0000988!7.33e-08!182 | |ontology_enrichment_celltype=CL:0002057!1.21e-20!42;CL:0002009!3.80e-19!65;CL:0002194!3.51e-18!63;CL:0000576!3.51e-18!63;CL:0000040!3.51e-18!63;CL:0000559!3.51e-18!63;CL:0000860!1.70e-17!45;CL:0000557!2.20e-16!71;CL:0002087!3.01e-15!119;CL:0000839!7.92e-15!70;CL:0000766!2.33e-14!76;CL:0000738!3.87e-14!140;CL:0002031!1.68e-13!124;CL:0000791!9.68e-10!18;CL:0000789!9.68e-10!18;CL:0002420!9.68e-10!18;CL:0002419!9.68e-10!18;CL:0000790!9.68e-10!18;CL:0000037!1.95e-09!172;CL:0000566!1.95e-09!172;CL:0000763!8.43e-09!112;CL:0000049!8.43e-09!112;CL:0002032!9.24e-09!165;CL:0000837!9.24e-09!165;CL:0000988!7.33e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.03e-19;39!CL:0000234;2.03e-19;39!CL:0000860;5.32e-19;33!CL:0002057;5.32e-19;33!CL:0000576;1.90e-16;48!CL:0000791;3.69e-11;18!CL:0000789;3.69e-11;18!CL:0002419;3.69e-11;18!CL:0000766;5.04e-10;69!CL:0000084;6.57e-08;25!CL:0002087;3.17e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.12e-30,48;CL:0000234,6.12e-30,48;CL:0002009,1.10e-28,61;CL:0002194,2.21e-27,59;CL:0000576,2.21e-27,59;CL:0000040,2.21e-27,59;CL:0000559,2.21e-27,59;CL:0000860,2.36e-25,42;CL:0002057,2.36e-25,42;CL:0000557,5.02e-24,67;CL:0002087,6.45e-23,115;CL:0000839,4.07e-22,66;CL:0000766,1.82e-21,72;CL:0000738,1.67e-20,136;CL:0002031,4.87e-20,120;CL:0000037,1.82e-15,168;CL:0002032,5.26e-15,161;CL:0000837,5.26e-15,161;CL:0000763,5.26e-15,108;CL:0000049,5.26e-15,108;CL:0000988,3.82e-13,177;CL:0000791,2.78e-11,18;CL:0000789,2.78e-11,18;CL:0002420,2.78e-11,18;CL:0002419,2.78e-11,18;CL:0000790,2.78e-11,18;CL:0000084,6.74e-08,25;CL:0000827,6.74e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-18;42!CL:0000790;3.69e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.95e-20!112;UBERON:0002390!4.44e-19!102;UBERON:0003061!4.44e-19!102;UBERON:0007023!1.60e-16!115;UBERON:0002405!1.28e-15!115;UBERON:0002371!5.50e-14!80;UBERON:0001474!8.15e-12!86;UBERON:0004765!1.64e-10!101;UBERON:0001434!1.64e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.18e-27,108;UBERON:0002390,1.45e-25,98;UBERON:0003061,1.45e-25,98;UBERON:0002405,3.92e-23,93;UBERON:0002371,3.70e-19,76;UBERON:0007023,1.57e-17,114;UBERON:0001474,3.42e-16,82;UBERON:0004765,1.36e-13,90;UBERON:0001434,3.51e-11,100;UBERON:0003081,5.75e-09,203 | |||
|phase1_expression=1.2717486548939,0.642301571672949,1.40954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0,1.34465029290355,0,0,0,0.123121058076788,0,0.313454721478088,0,0.273748850145768,0,0.382067028739756,0.492603536699674,0.472264687882075,1.96682138424452,4.98978217526377,3.71558695958582,2.75826367343678,0,0,0,0,0.880801318004542,3.32397245119126,1.60435557976113,0.651032612147555,12.9870975059156,15.87078963493,13.9090806522461,25.0084970700851,10.5805264232867,12.6143711817664,3.48643555358527,3.70051099219643,4.95530193432166,7.19230980805376,9.22178543504762,13.0065226438722,3.7922024881028,1.29096936716765,1.35426486594342,4.51781614902251,6.27684145133045,8.98893937780339,4.28517449319264,4.49300637906531,3.83602275479425,33.3149813188583,25.3318845179472,16.6227652707751,2.32167390902867,2.8369261234557,3.11411124497787,10.3011952755265,11.4726242052444,20.6329402469861,3.02699751316684,3.31449872388808,3.79754864929061,27.0406766479285,23.8116815960849,32.7067486993066,10.89587722121,19.8233498550788,18.1619912967701,13.6806116995799,20.4884177515063,23.7463399894024,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,2.80254281490768,0,7.67168103443949,3.14408610199332,7.40165396398233,15.3811575759424,6.51844533267181,10.4158517261641,3.89653456815823,12.812202541795,10.900418576569,19.273448828775,14.3526047795458,7.94166182299186,12.2255786706286,13.3194702728978,19.6208512627952,17.6779882298382,5.04174314751005,9.63146981122967,5.22677619024884,30.2535945002502,9.58051234004803,18.8995095015446,12.1449452169361,13.6983128159362,8.46408490013344,7.60361635558699,8.13105643019973,9.21503600311812,4.99722906209383,12.3124171062889,12.3169199538157,3.42731463482045,0.802320587350522,1.88271725047639,0,2.68280343881454,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.850813354476611,0.221729397462564,0.527008714158756,1.30979075497713,0.364295288292542,0,1.9472843619281,2.96020553408754,1.59549552622638,0.238490624305342,1.71598473234038,0.74291500265913,0.79504962946682,0.860234595106124,0,0.56530794192401,1.25849830862972,0.825354125820202,0,3.35941786920128,4.98072767761394,6.6944122552934,1.61131726843659,0,0.488124115096339,1.47065232138347,0.81014194788176,6.1616812516015,1.79623498100936,1.57656072676651,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.933633106199299,1.0776853765575,0.980771418680752,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0,1.04614076386261,0,0,0.140450806702248,3.87892925384297,0.122834317311768,0.619954687054593,0,0.741800787835671,0,0,0.505008341862199,0.125118519871964,1.10825646193673,0.877955241761676,0,0.600952235626387,2.26864366320042,0.179389635688862,1.06778694409284,0.635795703478686,2.10063767259082,0.92747276314595,1.03056216018252,0.930584281657949,0,0.292311015483596,0.757301322732344,1.38074847963449,0.323292113637624,2.4850671476163,1.30977727695932,0.339121184620975,1.15956511897978,3.00020732649918,1.72082757233402,0.365921118388786,0.795178609928912,0.580969714347592,1.0366105501537,0.504641701751257,0.36497735907583,0,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,7.08947888017685,0,0,0,1.09750285408626,0,0.904760751704678,2.40729957412177,0,0,0,0.463721619900307,0.587043471179108,1.58803092537181,1.85194205030644,1.14152491340759,0,0,27.5763046817885,7.02012795417713,2.67536092119711,0.93733833986777,2.18376766658517,0.567100388969546,1.70161193135412,2.90633938513962,0,0,0,0.414656231081544,0.576479813667846,0.50496973370552,6.28629153492474,0.763976851116555,2.34434894420094,0,1.7480673759565,0.300343057843917,7.14566081576446,0.672786506072164,0.87192013766656,0.80672114403045,0.387815147273333,0,0,0.531876233169741,1.04007436911366,1.02882949704857,0,0,2.43062589218851,1.62786481617433,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,18.2435670961786,25.6151116630384,31.6250909224547,0.479249710983165,0,0,1.59259437334337,0.205476322550383,1.43248770591916,18.6061339029255,6.10795356625974,3.88129634747131,1.54011643535698,0.254094624222463,0,0,0.837581326671744,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0.271265023699736,1.66376689224646,0.356857977594324,0.473107245101804,0.468565659970853,0.601892199455438,0,0,1.32845119707087,0,2.5196248195744,0.195801157462741,0,9.51132920165282,3.01999881146064,2.66818894508611,0,0,0,0.248107807818777,0.460385919864187,0.841980283299221,0.384417447767103,1.02341449813341,0.321707842287215,0,0.154209693802656,0.177561725313127,0.574890092096664,0,0.116210378459959,0,2.40607764363942,0.828728900423067,0.574072240823034,0,0.393373244878272,0,0.462092022626489,0,0,0.211103257785751,0,0.170093705276516,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,4.4307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| |phase1_expression=1.2717486548939,0.642301571672949,1.40954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0,1.34465029290355,0,0,0,0.123121058076788,0,0.313454721478088,0,0.273748850145768,0,0.382067028739756,0.492603536699674,0.472264687882075,1.96682138424452,4.98978217526377,3.71558695958582,2.75826367343678,0,0,0,0,0.880801318004542,3.32397245119126,1.60435557976113,0.651032612147555,12.9870975059156,15.87078963493,13.9090806522461,25.0084970700851,10.5805264232867,12.6143711817664,3.48643555358527,3.70051099219643,4.95530193432166,7.19230980805376,9.22178543504762,13.0065226438722,3.7922024881028,1.29096936716765,1.35426486594342,4.51781614902251,6.27684145133045,8.98893937780339,4.28517449319264,4.49300637906531,3.83602275479425,33.3149813188583,25.3318845179472,16.6227652707751,2.32167390902867,2.8369261234557,3.11411124497787,10.3011952755265,11.4726242052444,20.6329402469861,3.02699751316684,3.31449872388808,3.79754864929061,27.0406766479285,23.8116815960849,32.7067486993066,10.89587722121,19.8233498550788,18.1619912967701,13.6806116995799,20.4884177515063,23.7463399894024,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,2.80254281490768,0,7.67168103443949,3.14408610199332,7.40165396398233,15.3811575759424,6.51844533267181,10.4158517261641,3.89653456815823,12.812202541795,10.900418576569,19.273448828775,14.3526047795458,7.94166182299186,12.2255786706286,13.3194702728978,19.6208512627952,17.6779882298382,5.04174314751005,9.63146981122967,5.22677619024884,30.2535945002502,9.58051234004803,18.8995095015446,12.1449452169361,13.6983128159362,8.46408490013344,7.60361635558699,8.13105643019973,9.21503600311812,4.99722906209383,12.3124171062889,12.3169199538157,3.42731463482045,0.802320587350522,1.88271725047639,0,2.68280343881454,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.850813354476611,0.221729397462564,0.527008714158756,1.30979075497713,0.364295288292542,0,1.9472843619281,2.96020553408754,1.59549552622638,0.238490624305342,1.71598473234038,0.74291500265913,0.79504962946682,0.860234595106124,0,0.56530794192401,1.25849830862972,0.825354125820202,0,3.35941786920128,4.98072767761394,6.6944122552934,1.61131726843659,0,0.488124115096339,1.47065232138347,0.81014194788176,6.1616812516015,1.79623498100936,1.57656072676651,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.933633106199299,1.0776853765575,0.980771418680752,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0,1.04614076386261,0,0,0.140450806702248,3.87892925384297,0.122834317311768,0.619954687054593,0,0.741800787835671,0,0,0.505008341862199,0.125118519871964,1.10825646193673,0.877955241761676,0,0.600952235626387,2.26864366320042,0.179389635688862,1.06778694409284,0.635795703478686,2.10063767259082,0.92747276314595,1.03056216018252,0.930584281657949,0,0.292311015483596,0.757301322732344,1.38074847963449,0.323292113637624,2.4850671476163,1.30977727695932,0.339121184620975,1.15956511897978,3.00020732649918,1.72082757233402,0.365921118388786,0.795178609928912,0.580969714347592,1.0366105501537,0.504641701751257,0.36497735907583,0,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,7.08947888017685,0,0,0,1.09750285408626,0,0.904760751704678,2.40729957412177,0,0,0,0.463721619900307,0.587043471179108,1.58803092537181,1.85194205030644,1.14152491340759,0,0,27.5763046817885,7.02012795417713,2.67536092119711,0.93733833986777,2.18376766658517,0.567100388969546,1.70161193135412,2.90633938513962,0,0,0,0.414656231081544,0.576479813667846,0.50496973370552,6.28629153492474,0.763976851116555,2.34434894420094,0,1.7480673759565,0.300343057843917,7.14566081576446,0.672786506072164,0.87192013766656,0.80672114403045,0.387815147273333,0,0,0.531876233169741,1.04007436911366,1.02882949704857,0,0,2.43062589218851,1.62786481617433,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,18.2435670961786,25.6151116630384,31.6250909224547,0.479249710983165,0,0,1.59259437334337,0.205476322550383,1.43248770591916,18.6061339029255,6.10795356625974,3.88129634747131,1.54011643535698,0.254094624222463,0,0,0.837581326671744,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0.271265023699736,1.66376689224646,0.356857977594324,0.473107245101804,0.468565659970853,0.601892199455438,0,0,1.32845119707087,0,2.5196248195744,0.195801157462741,0,9.51132920165282,3.01999881146064,2.66818894508611,0,0,0,0.248107807818777,0.460385919864187,0.841980283299221,0.384417447767103,1.02341449813341,0.321707842287215,0,0.154209693802656,0.177561725313127,0.574890092096664,0,0.116210378459959,0,2.40607764363942,0.828728900423067,0.574072240823034,0,0.393373244878272,0,0.462092022626489,0,0,0.211103257785751,0,0.170093705276516,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,4.4307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| ||
|short_description=p2@LPAR6 | |short_description=p2@LPAR6 | ||
}} | }} |
Latest revision as of 15:22, 17 September 2015
Short description: | p2@LPAR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPAR6_5end |
Coexpression cluster: | C3377_CD14_CD4_acute_immature_esophagus_NK_CD14CD16 |
Association with transcript: | 413bp_to_NM_001162498, uc010acu.2_5end |
EntrezGene: | LPAR6 |
HGNC: | 15520 |
UniProt: | B3KVQ5F2YGU4P43657 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.12e-30 | 48 |
phagocyte | 6.12e-30 | 48 |
macrophage dendritic cell progenitor | 1.10e-28 | 61 |
monopoietic cell | 2.21e-27 | 59 |
monocyte | 2.21e-27 | 59 |
monoblast | 2.21e-27 | 59 |
promonocyte | 2.21e-27 | 59 |
classical monocyte | 2.36e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-25 | 42 |
granulocyte monocyte progenitor cell | 5.02e-24 | 67 |
nongranular leukocyte | 6.45e-23 | 115 |
myeloid lineage restricted progenitor cell | 4.07e-22 | 66 |
myeloid leukocyte | 1.82e-21 | 72 |
leukocyte | 1.67e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 4.87e-20 | 120 |
hematopoietic stem cell | 1.82e-15 | 168 |
hematopoietic oligopotent progenitor cell | 5.26e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.26e-15 | 161 |
myeloid cell | 5.26e-15 | 108 |
common myeloid progenitor | 5.26e-15 | 108 |
hematopoietic cell | 3.82e-13 | 177 |
mature alpha-beta T cell | 2.78e-11 | 18 |
alpha-beta T cell | 2.78e-11 | 18 |
immature T cell | 2.78e-11 | 18 |
mature T cell | 2.78e-11 | 18 |
immature alpha-beta T cell | 2.78e-11 | 18 |
T cell | 6.74e-08 | 25 |
pro-T cell | 6.74e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.18e-27 | 108 |
hematopoietic system | 1.45e-25 | 98 |
blood island | 1.45e-25 | 98 |
immune system | 3.92e-23 | 93 |
bone marrow | 3.70e-19 | 76 |
adult organism | 1.57e-17 | 114 |
bone element | 3.42e-16 | 82 |
skeletal element | 1.36e-13 | 90 |
skeletal system | 3.51e-11 | 100 |
lateral plate mesoderm | 5.75e-09 | 203 |