FFCP PHASE1:Hg19::chr9:6758109..6758131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYH2 | |UniProt=F5GYH2 | ||
|association_with_transcript=0bp_to_ENST00000536108_5end | |association_with_transcript=0bp_to_ENST00000536108_5end | ||
|cluster_id=chr9:6758109..6758131,+ | |||
|description=CAGE_peak_6_at_KDM4C_5end | |description=CAGE_peak_6_at_KDM4C_5end | ||
|id=chr9:6758109..6758131,+ | |id=chr9:6758109..6758131,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.46e-21!140;CL:0000557!1.29e-20!71;CL:0002031!1.39e-19!124;CL:0002009!4.60e-19!65;CL:0000839!1.23e-18!70;CL:0002087!1.63e-18!119;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172;CL:0002194!7.53e-18!63;CL:0000576!7.53e-18!63;CL:0000040!7.53e-18!63;CL:0000559!7.53e-18!63;CL:0000766!9.20e-18!76;CL:0002057!2.95e-17!42;CL:0002032!3.17e-17!165;CL:0000837!3.17e-17!165;CL:0000860!1.52e-16!45;CL:0000988!1.62e-16!182;CL:0000763!1.55e-15!112;CL:0000049!1.55e-15!112 | |ontology_enrichment_celltype=CL:0000738!2.46e-21!140;CL:0000557!1.29e-20!71;CL:0002031!1.39e-19!124;CL:0002009!4.60e-19!65;CL:0000839!1.23e-18!70;CL:0002087!1.63e-18!119;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172;CL:0002194!7.53e-18!63;CL:0000576!7.53e-18!63;CL:0000040!7.53e-18!63;CL:0000559!7.53e-18!63;CL:0000766!9.20e-18!76;CL:0002057!2.95e-17!42;CL:0002032!3.17e-17!165;CL:0000837!3.17e-17!165;CL:0000860!1.52e-16!45;CL:0000988!1.62e-16!182;CL:0000763!1.55e-15!112;CL:0000049!1.55e-15!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-17;33!CL:0002057;2.12e-17;33!CL:0000473;2.08e-15;39!CL:0000234;2.08e-15;39!CL:0000576;3.71e-15;48!CL:0000766;6.03e-12;69!CL:0000738;9.65e-08;136!CL:0002087;1.27e-07;104!CL:0000990;2.56e-07;8!CL:0000451;6.71e-07;10!CL:0000039;6.90e-07;7!CL:0000586;6.90e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.14e-29,67;CL:0000738,1.43e-27,136;CL:0002009,5.88e-27,61;CL:0000766,4.36e-26,72;CL:0000839,6.76e-26,66;CL:0002194,2.52e-25,59;CL:0000576,2.52e-25,59;CL:0000040,2.52e-25,59;CL:0000559,2.52e-25,59;CL:0002031,1.61e-24,120;CL:0002087,3.74e-23,115;CL:0000473,1.34e-22,48;CL:0000234,1.34e-22,48;CL:0000860,4.06e-22,42;CL:0002057,4.06e-22,42;CL:0000037,5.94e-21,168;CL:0000988,3.70e-20,177;CL:0002032,1.21e-19,161;CL:0000837,1.21e-19,161;CL:0000763,3.96e-19,108;CL:0000049,3.96e-19,108;CL:0000990,3.01e-07,8;CL:0000039,6.16e-07,7;CL:0000586,6.16e-07,7;CL:0000451,7.86e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-18!102;UBERON:0003061!1.43e-18!102;UBERON:0001474!1.65e-17!86;UBERON:0002371!3.89e-17!80;UBERON:0002193!4.87e-16!112;UBERON:0004765!1.84e-13!101;UBERON:0001434!1.84e-13!101;UBERON:0002405!5.20e-12!115;UBERON:0007023!5.96e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.03e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.26e-25,98;UBERON:0003061,5.26e-25,98;UBERON:0002371,1.21e-24,76;UBERON:0001474,2.73e-24,82;UBERON:0002405,1.84e-22,93;UBERON:0002193,1.80e-21,108;UBERON:0004765,9.84e-20,90;UBERON:0001434,5.03e-17,100;UBERON:0007023,9.34e-09,114 | |||
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| ||
|short_description=p6@KDM4C | |short_description=p6@KDM4C | ||
}} | }} |
Latest revision as of 15:27, 17 September 2015
Short description: | p6@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536108_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | F5GYH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.14e-29 | 67 |
leukocyte | 1.43e-27 | 136 |
macrophage dendritic cell progenitor | 5.88e-27 | 61 |
myeloid leukocyte | 4.36e-26 | 72 |
myeloid lineage restricted progenitor cell | 6.76e-26 | 66 |
monopoietic cell | 2.52e-25 | 59 |
monocyte | 2.52e-25 | 59 |
monoblast | 2.52e-25 | 59 |
promonocyte | 2.52e-25 | 59 |
hematopoietic lineage restricted progenitor cell | 1.61e-24 | 120 |
nongranular leukocyte | 3.74e-23 | 115 |
defensive cell | 1.34e-22 | 48 |
phagocyte | 1.34e-22 | 48 |
classical monocyte | 4.06e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-22 | 42 |
hematopoietic stem cell | 5.94e-21 | 168 |
hematopoietic cell | 3.70e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.21e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-19 | 161 |
myeloid cell | 3.96e-19 | 108 |
common myeloid progenitor | 3.96e-19 | 108 |
conventional dendritic cell | 3.01e-07 | 8 |
germ line cell | 6.16e-07 | 7 |
germ cell | 6.16e-07 | 7 |
dendritic cell | 7.86e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.26e-25 | 98 |
blood island | 5.26e-25 | 98 |
bone marrow | 1.21e-24 | 76 |
bone element | 2.73e-24 | 82 |
immune system | 1.84e-22 | 93 |
hemolymphoid system | 1.80e-21 | 108 |
skeletal element | 9.84e-20 | 90 |
skeletal system | 5.03e-17 | 100 |
adult organism | 9.34e-09 | 114 |