FFCP PHASE1:Hg19::chr17:74547226..74547238,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |EntrezGene=114757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |HGNC=16505 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_uc002jrv.1_5end | |association_with_transcript=-58bp_to_uc002jrv.1_5end | ||
|cluster_id=chr17:74547226..74547238,- | |||
|description=CAGE_peak_16_at_CYGB_5end | |description=CAGE_peak_16_at_CYGB_5end | ||
|id=chr17:74547226..74547238,- | |id=chr17:74547226..74547238,- | ||
|ontology_enrichment_celltype=CL:0002159!1.00e-09!13;CL:0000244!3.26e-07!4;CL:0000731!3.26e-07!4 | |ontology_enrichment_celltype=CL:0002159!1.00e-09!13;CL:0000244!3.26e-07!4;CL:0000731!3.26e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;7.06e-33;4!CL:0000731;7.06e-33;4!CL:0000317;1.13e-16;2!CL:1000448;1.13e-16;2!CL:0002308;1.13e-16;2!CL:0002140;1.13e-16;2!CL:0000154;2.32e-12;6!CL:0000346;1.97e-11;3!CL:1000428;1.97e-11;3!CL:0002336;1.37e-09;1!CL:0002261;1.37e-09;1!CL:0002170;1.37e-09;1!CL:0000511;3.39e-09;1!CL:0002625;3.39e-09;1!CL:0000216;3.39e-09;1!CL:0000362;1.34e-08;9!CL:0000622;3.34e-07;5!CL:0002559;3.34e-07;5!CL:0000182;9.55e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.52e-33,4;CL:0000731,4.52e-33,4;CL:0000317,9.68e-17,2;CL:1000448,9.68e-17,2;CL:0002308,9.68e-17,2;CL:0002140,9.68e-17,2;CL:0000154,1.95e-12,6;CL:0000346,1.43e-11,3;CL:1000428,1.43e-11,3;CL:0002336,1.43e-09,1;CL:0002261,1.43e-09,1;CL:0002170,1.43e-09,1;CL:0000511,2.77e-09,1;CL:0002625,2.77e-09,1;CL:0000216,2.77e-09,1;CL:0000362,1.24e-08,9;CL:0000223,7.77e-08,58;CL:0002559,2.76e-07,5;CL:0000622,3.14e-07,5;CL:0000182,9.19e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.11e-12;11!UBERON:0009497;2.84e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.15e-08!169;UBERON:0000925!1.15e-08!169;UBERON:0006595!1.15e-08!169;UBERON:0002365!1.61e-07!31;UBERON:0002330!1.61e-07!31;UBERON:0004457!2.41e-07!12;UBERON:0000042!2.41e-07!12;UBERON:0000475!7.71e-07!365 | |ontology_enrichment_uberon=UBERON:0004119!1.15e-08!169;UBERON:0000925!1.15e-08!169;UBERON:0006595!1.15e-08!169;UBERON:0002365!1.61e-07!31;UBERON:0002330!1.61e-07!31;UBERON:0004457!2.41e-07!12;UBERON:0000042!2.41e-07!12;UBERON:0000475!7.71e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.28e-26;5!UBERON:0005910;5.05e-22;6!UBERON:0000486;9.12e-17;12!UBERON:0002419;1.13e-16;2!UBERON:0007771;1.13e-16;2!UBERON:0003297;1.13e-16;2!UBERON:0001821;1.13e-16;2!UBERON:0003487;1.13e-16;2!UBERON:0001820;1.13e-16;2!UBERON:0001003;3.87e-13;15!UBERON:0007376;3.87e-13;15!UBERON:0000412;1.97e-11;3!UBERON:0001992;1.97e-11;3!UBERON:0001136;3.39e-09;1!UBERON:0001343;3.39e-09;1!UBERON:0002171;3.39e-09;1!UBERON:0006518;3.39e-09;1!UBERON:0008949;3.39e-09;1!UBERON:0004910;3.39e-09;1!UBERON:0000101;3.39e-09;1!UBERON:0004813;3.39e-09;1!UBERON:0002167;3.39e-09;1!UBERON:0010371;1.50e-08;31!UBERON:0002365;2.08e-08;31!UBERON:0002330;2.08e-08;31!UBERON:0002073;3.34e-07;5!UBERON:0002107;4.58e-07;19!UBERON:0006925;4.58e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.60e-26,5;UBERON:0005910,3.76e-22,6;UBERON:0002419,9.68e-17,2;UBERON:0007771,9.68e-17,2;UBERON:0003297,9.68e-17,2;UBERON:0001821,9.68e-17,2;UBERON:0003487,9.68e-17,2;UBERON:0001820,9.68e-17,2;UBERON:0005089,9.68e-17,2;UBERON:0005088,9.68e-17,2;UBERON:0001003,3.07e-13,15;UBERON:0007376,3.07e-13,15;UBERON:0007383,3.07e-13,15;UBERON:0000412,1.43e-11,3;UBERON:0001992,1.43e-11,3;UBERON:0005911,4.86e-10,82;UBERON:0001136,2.77e-09,1;UBERON:0001343,2.77e-09,1;UBERON:0004910,2.77e-09,1;UBERON:0005154,2.77e-09,1;UBERON:0005295,2.77e-09,1;UBERON:0004813,2.77e-09,1;UBERON:0005297,2.77e-09,1;UBERON:0005294,2.77e-09,1;UBERON:0010141,2.77e-09,1;UBERON:0005891,2.77e-09,1;UBERON:0002171,4.50e-09,1;UBERON:0006518,4.50e-09,1;UBERON:0008949,4.50e-09,1;UBERON:0000101,4.50e-09,1;UBERON:0002167,4.50e-09,1;UBERON:0002365,6.51e-09,31;UBERON:0002330,6.51e-09,31;UBERON:0004119,1.51e-08,160;UBERON:0000925,1.51e-08,160;UBERON:0006595,1.51e-08,160;UBERON:0002073,2.76e-07,5;UBERON:0005086,2.76e-07,5;UBERON:0002107,4.55e-07,19;UBERON:0006925,4.55e-07,19;UBERON:0008836,4.55e-07,19 | |||
|phase1_expression=0,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,1.14721838155602,0,0,0,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.98775256867763,3.37205259772859,0.201057944823262,2.22212268380471,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.445893486866185,0.93733833986777,0.671928512795438,0.567100388969546,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.640695746278505,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,1.60405176242628,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0,1.14853107599234,1.95018073810956,1.6068392984416,0.096670718292122,0,0,0,0.214840489736547,0,0,0,1.32227932288782,0,2.16941611240793,0.50578890427775,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.511795582622668,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0.769776901804097,0,0,0.470719003883896,2.15252686335615,1.68471475667626,3.10401107475673,2.75668080248351,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.69169171316418,1.07709173291727,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,2.36349546921671,3.04938676010316,2.6961417541674,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,0.640724475406168,0.157204305099666,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.248385611765534,0,1.62474530350739,0,0,0.470531639396343,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,1.34940933649081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.926404341482917,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0.584580926518165,0,0.654261577023377,0,0,0,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,0,0,0.3414369541879,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.599646935549574,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0.743990036333503,0,0,0,0,0,0,0,0.275684698604535,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,1.14721838155602,0,0,0,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.98775256867763,3.37205259772859,0.201057944823262,2.22212268380471,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.445893486866185,0.93733833986777,0.671928512795438,0.567100388969546,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.640695746278505,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,1.60405176242628,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0,1.14853107599234,1.95018073810956,1.6068392984416,0.096670718292122,0,0,0,0.214840489736547,0,0,0,1.32227932288782,0,2.16941611240793,0.50578890427775,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.511795582622668,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0.769776901804097,0,0,0.470719003883896,2.15252686335615,1.68471475667626,3.10401107475673,2.75668080248351,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.69169171316418,1.07709173291727,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,2.36349546921671,3.04938676010316,2.6961417541674,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,0.640724475406168,0.157204305099666,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.248385611765534,0,1.62474530350739,0,0,0.470531639396343,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,1.34940933649081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.926404341482917,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0.584580926518165,0,0.654261577023377,0,0,0,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,0,0,0.3414369541879,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.599646935549574,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0.743990036333503,0,0,0,0,0,0,0,0.275684698604535,0,0.303114792872958,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p16@CYGB | |short_description=p16@CYGB | ||
}} | }} |
Latest revision as of 15:49, 17 September 2015
Short description: | p16@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_uc002jrv.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.52e-33 | 4 |
urothelial cell | 4.52e-33 | 4 |
sebum secreting cell | 9.68e-17 | 2 |
epithelial cell of sweat gland | 9.68e-17 | 2 |
epithelial cell of skin gland | 9.68e-17 | 2 |
acinar cell of sebaceous gland | 9.68e-17 | 2 |
protein secreting cell | 1.95e-12 | 6 |
hair follicle dermal papilla cell | 1.43e-11 | 3 |
stem cell of epidermis | 1.43e-11 | 3 |
buccal mucosa cell | 1.43e-09 | 1 |
endothelial cell of viscerocranial mucosa | 1.43e-09 | 1 |
keratinized cell of the oral mucosa | 1.43e-09 | 1 |
androgen binding protein secreting cell | 2.77e-09 | 1 |
seminiferous tubule epithelial cell | 2.77e-09 | 1 |
Sertoli cell | 2.77e-09 | 1 |
epidermal cell | 1.24e-08 | 9 |
endodermal cell | 7.77e-08 | 58 |
hair follicle cell | 2.76e-07 | 5 |
acinar cell | 3.14e-07 | 5 |
hepatocyte | 9.19e-07 | 12 |