FFCP PHASE1:Hg19::chr1:34630978..34630987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=114784 | |EntrezGene=114784 | ||
Line 8: | Line 8: | ||
|UniProt=E7EUA6,Q53TY4 | |UniProt=E7EUA6,Q53TY4 | ||
|association_with_transcript=-103bp_to_ENST00000373381,uc001bxm.1_5end | |association_with_transcript=-103bp_to_ENST00000373381,uc001bxm.1_5end | ||
|cluster_id=chr1:34630978..34630987,- | |||
|coexpression_cluster_id=C1856 | |coexpression_cluster_id=C1856 | ||
|description=CAGE_peak_5_at_CSMD2_5end | |description=CAGE_peak_5_at_CSMD2_5end |
Latest revision as of 17:38, 17 September 2015
Short description: | p5@CSMD2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSMD2_5end |
Coexpression cluster: | C1856_brain_parietal_temporal_occipital_duodenum_Fibroblast_neuroectodermal |
Association with transcript: | -103bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@CSMD2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hair follicle dermal papilla cell | 1.32e-15 | 3 |
stem cell of epidermis | 1.32e-15 | 3 |
hair follicle cell | 9.70e-10 | 5 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
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dermal papilla | 1.32e-15 | 3 |
papillary layer of dermis | 1.32e-15 | 3 |
hair follicle | 9.70e-10 | 5 |
hair follicle placode | 9.70e-10 | 5 |
regional part of cerebral cortex | 4.73e-08 | 22 |
cerebral cortex | 3.86e-07 | 25 |
pallium | 3.86e-07 | 25 |
Ammon's horn | 9.54e-07 | 2 |
lobe parts of cerebral cortex | 9.54e-07 | 2 |
hippocampal formation | 9.54e-07 | 2 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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skin squamous cell carcinoma | 4.81e-12 | 1 |
keratoacanthoma | 4.81e-12 | 1 |
Showing 1 to 2 of 2 entries