FFCP PHASE1:Hg19::chr1:156722195..156722246,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:156722195..156722246,-
|short_description=p6@HDGF
|description=CAGE_peak_6_at_HDGF_5end
|association_with_transcript=0bp_to_ENST00000368206,NM_001126050,uc...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZ07,P51858 | |UniProt=Q5SZ07,P51858 | ||
|association_with_transcript=0bp_to_ENST00000368206,NM_001126050,uc009wse.2,uc010phr.1_5end | |||
|cluster_id=chr1:156722195..156722246,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_6_at_HDGF_5end | |||
|id=chr1:156722195..156722246,- | |||
|ontology_enrichment_celltype=CL:0000066!1.69e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.44e-08;10!CL:1000494;1.44e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.14e-11,253;CL:1000507,1.18e-08,10;CL:1000494,1.18e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.32e-13!235;DOID:14566!7.40e-13!239;DOID:305!1.07e-11!106;DOID:0050687!7.60e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.11e-11,235;DOID:14566,8.55e-11,239;DOID:305,1.30e-09,106;DOID:0050687,5.14e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.90e-07!238;UBERON:0009142!1.90e-07!238;UBERON:0001737!3.59e-07!9;UBERON:0001557!3.71e-07!19;UBERON:0000481!4.35e-07!347;UBERON:0000072!5.48e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.78e-09;9!UBERON:0001557;8.78e-09;9!UBERON:0004211;1.44e-08;10!UBERON:0009773;1.44e-08;10!UBERON:0001231;1.44e-08;10!UBERON:0004810;1.44e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,4.37e-09,19;UBERON:0001737,9.83e-09,9;UBERON:0004810,1.18e-08,10;UBERON:0000072,1.17e-07,47;UBERON:0000065,2.58e-07,54 | |||
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| ||
|short_description=p6@HDGF | |||
}} | }} |
Latest revision as of 18:00, 17 September 2015
Short description: | p6@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HDGF_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000368206, NM_001126050, uc009wse.2, uc010phr.1_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | Q5SZ07P51858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.14e-11 | 253 |
kidney tubule cell | 1.18e-08 | 10 |
nephron tubule epithelial cell | 1.18e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 4.37e-09 | 19 |
larynx | 9.83e-09 | 9 |
nephron tubule epithelium | 1.18e-08 | 10 |
segment of respiratory tract | 1.17e-07 | 47 |
respiratory tract | 2.58e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.11e-11 | 235 |
disease of cellular proliferation | 8.55e-11 | 239 |
carcinoma | 1.30e-09 | 106 |
cell type cancer | 5.14e-09 | 143 |