FFCP PHASE1:Hg19::chr1:156722195..156722246,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156722195..156722246,- to FFCP PHASE1:Hg19::chr1:156722195..156722246,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZ07,P51858 | |UniProt=Q5SZ07,P51858 | ||
|association_with_transcript=0bp_to_ENST00000368206,NM_001126050,uc009wse.2,uc010phr.1_5end | |||
|cluster_id=chr1:156722195..156722246,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_6_at_HDGF_5end | |||
|id=chr1:156722195..156722246,- | |||
|ontology_enrichment_celltype=CL:0000066!1.69e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.44e-08;10!CL:1000494;1.44e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.14e-11,253;CL:1000507,1.18e-08,10;CL:1000494,1.18e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.32e-13!235;DOID:14566!7.40e-13!239;DOID:305!1.07e-11!106;DOID:0050687!7.60e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.11e-11,235;DOID:14566,8.55e-11,239;DOID:305,1.30e-09,106;DOID:0050687,5.14e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.90e-07!238;UBERON:0009142!1.90e-07!238;UBERON:0001737!3.59e-07!9;UBERON:0001557!3.71e-07!19;UBERON:0000481!4.35e-07!347;UBERON:0000072!5.48e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.78e-09;9!UBERON:0001557;8.78e-09;9!UBERON:0004211;1.44e-08;10!UBERON:0009773;1.44e-08;10!UBERON:0001231;1.44e-08;10!UBERON:0004810;1.44e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,4.37e-09,19;UBERON:0001737,9.83e-09,9;UBERON:0004810,1.18e-08,10;UBERON:0000072,1.17e-07,47;UBERON:0000065,2.58e-07,54 | |||
|phase1_expression=1.63510541343501,0.428201047781966,1.40954404095971,1.0007329835313,2.23480547213644,3.48935409640147,0,1.89515962028049,0.522371256399677,1.47440361900905,0.697801167972428,1.09220686065086,2.11013582582763,3.58922423584135,3.97676850873499,2.01697543935533,1.20538905604795,0,0.975865597581014,2.70866327768933,2.44800829493104,1.88072832886853,1.14494394852423,1.09499540058307,0.376627918784408,2.9801228241701,4.43343183029707,5.35233312933019,0,0.767658796194425,0,1.83884244895785,3.614471025339,0.369754010166788,9.99326887485891,1.70603078984906,0.880801318004542,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,0.800791974072025,0,0.661044872784862,2.86216126360609,0.569212969109448,0,0,0,1.12101712596307,1.05353633910031,0.196709770113833,0,0.411202997999018,0.501559486172034,0,0,0,0.557052284425868,0.294605907474837,0,0,0.512365278902701,0.780356085359269,0.657751618414705,0.829050053357545,0.289803085735052,0.296573126324121,0,0,0.566546713487831,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.639312809217652,0.722878304769133,1.50401373190767,0.869079113764942,1.5905718941022,0,1.13441780596881,1.33037638477538,1.31752178539689,1.24430121722827,0.728590576585084,0.370784442784429,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0.732186172644509,0.735326160691737,2.43042584364528,0.267899184852239,0.44905874525234,0.450445921933289,1.53316637465883,0,0.366403487860815,0,0,5.66922267785295,1.98788780678127,1.64619665163954,1.19168262731897,1.72101972449288,0.354668382198357,2.80338800071154,3.20246987189115,0.98667019366864,0,0.134710672069688,0.490385709340376,0.756787138224657,0.576175924479999,1.17160715916898,1.24864030732128,1.1409436430889,0,0.704606991862589,0.323745888736263,0.702254033511242,0.61246251376468,3.0708579327942,0.619954687054593,0,0.247266929278557,0,0,0.673344455816265,1.25118519871964,0.277064115484183,2.19488810440419,0.30648779579902,0.300476117813194,1.58805056424029,1.25572744982203,0.640672166455702,1.05965950579781,0,0.721367704669072,0.772921620136887,1.67505170698431,0.675105328965065,1.55899208257918,1.7670364197088,1.01254888506529,0.646584227275248,2.84007674013291,1.0075209822764,0.67824236924195,1.35282597214308,0.545492241181669,0.860413786167011,3.29329006549908,4.24095258628753,7.32021840077966,2.07322110030741,5.2987378683882,4.01475094983413,1.56449532329816,2.57296375277154,2.76269842704961,0,0.721879481669586,6.15195360207188,5.39471008249925,5.78426471720357,4.74264082749294,7.84365998732662,4.74541238222193,6.33707148352773,5.29797955838434,5.38646019724947,0,0,2.8810180793198,0,0,0,0.590789906681404,7.06340959063441,4.05861847192275,2.05881372358231,0.768251997860379,0,0.301586917234893,1.29623823221941,0,0,0,1.97081688457631,1.6437217193015,0.866198686566443,0.462985512576611,0.190254152234598,3.95102198979638,6.86788929675898,0,0.234004265139238,0.148631162288728,0,1.34385702559088,0.850650583454319,1.25381931783988,0.290633938513962,1.15014803749563,0,0.176096868026452,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0.87192013766656,0.4400297149257,0.904902010304444,0,0.845302752556,1.06375246633948,1.04007436911366,1.02882949704857,1.41849132023278,0.266422179016099,0.285955987316295,1.62786481617433,0.823240336780769,0.325736184293735,0,0.791951872933429,2.41151501647669,2.61460037580088,1.3996218765488,0,0.502257091432126,2.10833939483032,0,1.14861935834114,1.42636905040718,0.868687840005475,0.821905290201534,1.61154866915906,0.448340575974109,0.197030760201927,0,0.385029108839245,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,3.18997878469764,1.00034104211935,0,2.07970861530807,1.96271887676878,3.15404830067869,1.40569697991256,0.902838299183157,0,1.03473071292505,0.664225598535437,0.921845842708516,0.868836144680828,0.783204629850962,0.686286847621712,0.206768026122887,0,0.106727557803444,3.03127571446259,3.32870879020994,1.20956117331872,0.496215615637554,1.38115775959256,0.841980283299221,1.53766979106841,0,1.12597744800525,8.90508398669946,1.23367755042124,1.77561725313127,1.31403449622095,0,1.74315567689939,5.31781578203138,2.20557117333613,0.920809889358963,0.68888668898764,0.364182336013434,1.04899531967539,5.41439535488894,2.77255213575893,7.0591479225917,2.92278449306521,4.01096189792928,1.13733384070897,0.510281115829547,0.863663664408557,0,5.1479823133332,5.51858751240339,4.33289664176565,3.3243040357149,4.25362033972139,1.09629938322967,1.5686127061494,1.2822506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| ||
|short_description=p6@HDGF | |||
}} | }} |
Latest revision as of 18:00, 17 September 2015
Short description: | p6@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HDGF_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000368206, NM_001126050, uc009wse.2, uc010phr.1_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | Q5SZ07P51858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.14e-11 | 253 |
kidney tubule cell | 1.18e-08 | 10 |
nephron tubule epithelial cell | 1.18e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 4.37e-09 | 19 |
larynx | 9.83e-09 | 9 |
nephron tubule epithelium | 1.18e-08 | 10 |
segment of respiratory tract | 1.17e-07 | 47 |
respiratory tract | 2.58e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.11e-11 | 235 |
disease of cellular proliferation | 8.55e-11 | 239 |
carcinoma | 1.30e-09 | 106 |
cell type cancer | 5.14e-09 | 143 |