FFCP PHASE1:Hg19::chr1:1567579..1567588,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8510 | |EntrezGene=8510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7171 | |HGNC=7171 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6U7,O75900 | |UniProt=C9J6U7,O75900 | ||
|association_with_transcript=19bp_to_ENST00000412415,NM_006983,uc001agp.2,uc001agq.2_5end | |association_with_transcript=19bp_to_ENST00000412415,NM_006983,uc001agp.2,uc001agq.2_5end | ||
|cluster_id=chr1:1567579..1567588,+ | |||
|coexpression_cluster_id=C2532 | |coexpression_cluster_id=C2532 | ||
|description=CAGE_peak_5_at_MMP23B_5end | |description=CAGE_peak_5_at_MMP23B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002195;2.30e-10;2!CL:0002571;2.30e-10;2!CL:0002579;2.98e-07;3!CL:0002615;3.53e-07;3!CL:0002504;6.31e-07;3!CL:1000279;6.31e-07;3!CL:1000280;6.31e-07;3 | |ontology_enrichment_celltype_v019=CL:0002195;2.30e-10;2!CL:0002571;2.30e-10;2!CL:0002579;2.98e-07;3!CL:0002615;3.53e-07;3!CL:0002504;6.31e-07;3!CL:1000279;6.31e-07;3!CL:1000280;6.31e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.21e-10,2;CL:0002571,2.21e-10,2;CL:0002579,4.39e-07,3;CL:0002615,5.96e-07,3;CL:0002504,8.05e-07,3;CL:1000279,8.05e-07,3;CL:1000280,8.05e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!4.10e-07!126;UBERON:0003688!4.29e-07!6;UBERON:0002358!4.29e-07!6;UBERON:0003684!4.29e-07!6;UBERON:0001178!4.29e-07!6;UBERON:0000468!4.33e-07!659;UBERON:0002323!5.03e-07!46 | |ontology_enrichment_uberon=UBERON:0000466!4.10e-07!126;UBERON:0003688!4.29e-07!6;UBERON:0002358!4.29e-07!6;UBERON:0003684!4.29e-07!6;UBERON:0001178!4.29e-07!6;UBERON:0000468!4.33e-07!659;UBERON:0002323!5.03e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.86e-13;6!UBERON:0002358;8.86e-13;6!UBERON:0003684;8.86e-13;6!UBERON:0001178;8.86e-13;6!UBERON:0000922;1.28e-08;49!UBERON:0004457;1.53e-08;9!UBERON:0000042;1.53e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;8.86e-13;6!UBERON:0002358;8.86e-13;6!UBERON:0003684;8.86e-13;6!UBERON:0001178;8.86e-13;6!UBERON:0000922;1.28e-08;49!UBERON:0004457;1.53e-08;9!UBERON:0000042;1.53e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.18e-12,6;UBERON:0002358,2.18e-12,6;UBERON:0003684,2.18e-12,6;UBERON:0001178,2.18e-12,6;UBERON:0003886,3.70e-08,54;UBERON:0002323,4.19e-08,46;UBERON:0004458,1.69e-07,49;UBERON:0002417,4.03e-07,60;UBERON:0000916,4.03e-07,60;UBERON:0009569,4.90e-07,112;UBERON:0002553,5.50e-07,61 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.986680828671798,1.0007329835313,2.23480547213644,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.975789649036763,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,1.57275793023962,7.05408087008876,0,0,2.13235169245527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,2.27407504055985,1.03473071292505,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,0,0.561320188866147,1.02511319404561,0,4.50390979202101,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,2.50844886927427,0,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.511795582622668,1.71175595213568,0,0,0.899362287916574,1.09814811894422,1.41374882814824,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,1.9676842561399,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,1.84296421259539,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0,0,0,0,0,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.199679000498991,0,0.669514372325618,1.81395375714161,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0.394028536495991,1.10154635083496,0.105600336519406,0,0,4.2881719582402,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.747511887973863,0.314408610199332,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,1.39210127963548,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33152017882697,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0.667388411352415,1.96232732126285,0,0,0.913158720509496,0,0,0.214429632529969,0,0,1.04314963381548,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0.231522474323834,1.31135736302374,0,0.980593287015622,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,1.46067277649303,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0.865253124247578,0.378499274505237,0,0.126698501011437,0.407955318967927,0,0.18378979906969,0,1.74291005901951,0,0,0,0,0.952257725854961,0,0.124149428591716,0.33639558774184,0,1.21270313374932,0,1.36893320434112,0,0.0717222053926763,2.66128285236811,0,0.106727345877715,0,0,9.38563769613817,0.244482888365733,1.62758471326295,0.665756774185513,1.00636896795513,0 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|phase1_expression=0.363356758541113,0.214100523890983,0.986680828671798,1.0007329835313,2.23480547213644,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.975789649036763,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,1.57275793023962,7.05408087008876,0,0,2.13235169245527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,2.27407504055985,1.03473071292505,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,0,0.561320188866147,1.02511319404561,0,4.50390979202101,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,2.50844886927427,0,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.511795582622668,1.71175595213568,0,0,0.899362287916574,1.09814811894422,1.41374882814824,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,1.9676842561399,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,1.84296421259539,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0,0,0,0,0,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.199679000498991,0,0.669514372325618,1.81395375714161,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0.394028536495991,1.10154635083496,0.105600336519406,0,0,4.2881719582402,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.747511887973863,0.314408610199332,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,1.39210127963548,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33152017882697,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0.667388411352415,1.96232732126285,0,0,0.913158720509496,0,0,0.214429632529969,0,0,1.04314963381548,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0.231522474323834,1.31135736302374,0,0.980593287015622,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,1.46067277649303,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0.865253124247578,0.378499274505237,0,0.126698501011437,0.407955318967927,0,0.18378979906969,0,1.74291005901951,0,0,0,0,0.952257725854961,0,0.124149428591716,0.33639558774184,0,1.21270313374932,0,1.36893320434112,0,0.0717222053926763,2.66128285236811,0,0.106727345877715,0,0,9.38563769613817,0.244482888365733,1.62758471326295,0.665756774185513,1.00636896795513,0 | ||
|short_description=p5@MMP23B | |short_description=p5@MMP23B | ||
}} | }} |
Latest revision as of 18:11, 17 September 2015
Short description: | p5@MMP23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MMP23B_5end |
Coexpression cluster: | C2532_Mesenchymal_Hepatic_umbilical_ovary_amniotic_diaphragm_Preadipocyte |
Association with transcript: | 19bp_to_ENST00000412415, NM_006983, uc001agp.2, uc001agq.2_5end |
EntrezGene: | MMP23B |
HGNC: | 7171 |
UniProt: | C9J6U7O75900 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.21e-10 | 2 |
hepatic mesenchymal stem cell | 2.21e-10 | 2 |
omentum preadipocyte | 4.39e-07 | 3 |
adipocyte of omentum tissue | 5.96e-07 | 3 |
enteric smooth muscle cell | 8.05e-07 | 3 |
smooth muscle cell of large intestine | 8.05e-07 | 3 |
smooth muscle cell of colon | 8.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.18e-12 | 6 |
peritoneum | 2.18e-12 | 6 |
abdominal cavity | 2.18e-12 | 6 |
visceral peritoneum | 2.18e-12 | 6 |
body cavity precursor | 3.70e-08 | 54 |
body cavity | 4.19e-08 | 46 |
body cavity or lining | 1.69e-07 | 49 |
abdominal segment of trunk | 4.03e-07 | 60 |
abdomen | 4.03e-07 | 60 |
subdivision of trunk | 4.90e-07 | 112 |
anatomical cavity | 5.50e-07 | 61 |