FFCP PHASE1:Hg19::chr17:75450049..75450060,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:75450049..75450060,+
|short_description=p39@SEPT9
|description=CAGE_peak_39_at_SEPT9_5end
|association_with_transcript=-14bp_to_uc010wtn.1_5end
|EntrezGe...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc010wtn.1_5end | |||
|cluster_id=chr17:75450049..75450060,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_39_at_SEPT9_5end | |||
|id=chr17:75450049..75450060,+ | |||
|ontology_enrichment_celltype=CL:0000838!9.85e-50!52;CL:0000542!1.72e-48!53;CL:0000051!1.72e-48!53;CL:0000738!7.44e-39!140;CL:0002087!1.07e-37!119;CL:0002031!4.14e-31!124;CL:0000037!1.17e-30!172;CL:0000566!1.17e-30!172;CL:0000084!1.38e-30!25;CL:0000827!1.38e-30!25;CL:0000988!1.06e-28!182;CL:0000791!7.98e-28!18;CL:0000789!7.98e-28!18;CL:0002420!7.98e-28!18;CL:0002419!7.98e-28!18;CL:0000790!7.98e-28!18;CL:0002032!4.61e-26!165;CL:0000837!4.61e-26!165;CL:0000625!1.88e-17!11;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000236!2.12e-10!14;CL:0000624!2.19e-10!6;CL:0002393!2.67e-09!9;CL:0002397!2.67e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.59e-62;25!CL:0000791;9.38e-60;18!CL:0000789;9.38e-60;18!CL:0002419;9.38e-60;18!CL:0000625;1.39e-36;11!CL:0000542;1.71e-22;53!CL:0000624;4.11e-21;6!CL:0000898;9.18e-12;3!CL:0000623;6.00e-11;3!CL:0000815;1.63e-08;2!CL:0000792;1.63e-08;2!CL:0002677;1.63e-08;2!CL:0002087;1.30e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.15e-62,25;CL:0000827,4.15e-62,25;CL:0000791,5.04e-60,18;CL:0000789,5.04e-60,18;CL:0002420,5.04e-60,18;CL:0002419,5.04e-60,18;CL:0000790,5.04e-60,18;CL:0000838,7.00e-42,52;CL:0000542,5.89e-41,53;CL:0000051,5.89e-41,53;CL:0000625,7.68e-37,11;CL:0000624,4.15e-21,6;CL:0002087,3.17e-19,115;CL:0000738,1.70e-16,136;CL:0002031,2.59e-15,120;CL:0000037,6.21e-13,168;CL:0000988,6.82e-12,177;CL:0000898,9.06e-12,3;CL:0000623,3.98e-11,3;CL:0000825,3.98e-11,3;CL:0002032,1.25e-10,161;CL:0000837,1.25e-10,161;CL:0000815,1.66e-08,2;CL:0000893,1.66e-08,2;CL:0002489,1.66e-08,2;CL:0000809,1.66e-08,2;CL:0000792,1.66e-08,2;CL:0002677,1.66e-08,2;CL:0000808,1.66e-08,2;CL:0000894,1.66e-08,2;CL:0000806,1.66e-08,2;CL:0000807,1.66e-08,2;CL:0000805,1.66e-08,2;CL:0002425,1.66e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;9.38e-60;18!CL:0000051;1.71e-22;53!CL:0002425;1.78e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.74e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.50e-10!7;UBERON:0000178!1.67e-10!15;UBERON:0000179!1.67e-10!15;UBERON:0000463!1.67e-10!15;UBERON:0002390!5.58e-10!102;UBERON:0003061!5.58e-10!102;UBERON:0002193!1.11e-09!112;UBERON:0002370!1.50e-07!4;UBERON:0005058!1.50e-07!4;UBERON:0009113!1.50e-07!4;UBERON:0003295!1.50e-07!4;UBERON:0005562!1.50e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.71e-10;15!UBERON:0000179;2.71e-10;15!UBERON:0000463;2.71e-10;15!UBERON:0002370;7.76e-08;2!UBERON:0005058;7.76e-08;2!UBERON:0009113;7.76e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.81e-15,4;UBERON:0005058,7.81e-15,4;UBERON:0009113,7.81e-15,4;UBERON:0003295,7.81e-15,4;UBERON:0005562,7.81e-15,4;UBERON:0000178,3.61e-10,15;UBERON:0000179,3.61e-10,15;UBERON:0000463,3.61e-10,15;UBERON:0003351,6.74e-10,6;UBERON:0001042,1.05e-08,10;UBERON:0009145,1.05e-08,10;UBERON:0004177,1.75e-08,7;UBERON:0005057,1.75e-08,7;UBERON:0006562,7.03e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.314843125254717,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0,0,0,0,0.570025487482497,0.59675003159727,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,0.764546456250458,0,0,0,2.16380747125216,1.96505381374582,2.05601498999509,1.17030546773475,2.28145586643513,0.946895611469467,1.94826728407911,2.22820913770347,5.00830042707223,2.87994062958707,3.79125409271022,2.94610035369053,2.21100890851793,2.46656856905514,2.21080014228679,1.73881851441031,3.41059095272739,2.67540828089713,5.22677619024884,2.15287751125376,2.29932296161153,3.09264700934367,3.54227568827304,1.59282707162048,1.95325036156926,1.90090408889675,2.25862678616659,4.09557155694139,3.74792179657038,3.07810427657222,1.64225599384209,1.61285394579786,2.40696176205157,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,4.59549090373462,1.77327684181734,3.23441362289276,1.79680250791648,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,1.6541442089831,0.431428401637234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,3.0585488285695,1.70894156152249,0.476463550915578,1.23408681925858,0,1.08006287447623,0.79312517629427,0,0,0,0,0.721346064882224,1.28055318027145,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.861593638227486,0,0,0,1.02314474045374,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.729819156862664,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0.315132729228895,0.494495150286999,0.202210631562555,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,1.48849806543585,0,1.94868157409433,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,1.19992437512958,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.45120521581504,0.799529247399431,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0.213233981900981,0,2.51896748360424,1.80016671457988,0,0,0,0,0,1.68380132536469,0.143444410785353,0,0,0,0,0,0,0,0,0,1.00636896795513,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.314843125254717,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0,0,0,0,0.570025487482497,0.59675003159727,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,0.764546456250458,0,0,0,2.16380747125216,1.96505381374582,2.05601498999509,1.17030546773475,2.28145586643513,0.946895611469467,1.94826728407911,2.22820913770347,5.00830042707223,2.87994062958707,3.79125409271022,2.94610035369053,2.21100890851793,2.46656856905514,2.21080014228679,1.73881851441031,3.41059095272739,2.67540828089713,5.22677619024884,2.15287751125376,2.29932296161153,3.09264700934367,3.54227568827304,1.59282707162048,1.95325036156926,1.90090408889675,2.25862678616659,4.09557155694139,3.74792179657038,3.07810427657222,1.64225599384209,1.61285394579786,2.40696176205157,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,4.59549090373462,1.77327684181734,3.23441362289276,1.79680250791648,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,1.6541442089831,0.431428401637234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,3.0585488285695,1.70894156152249,0.476463550915578,1.23408681925858,0,1.08006287447623,0.79312517629427,0,0,0,0,0.721346064882224,1.28055318027145,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.861593638227486,0,0,0,1.02314474045374,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.729819156862664,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0.315132729228895,0.494495150286999,0.202210631562555,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,1.48849806543585,0,1.94868157409433,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,1.19992437512958,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.45120521581504,0.799529247399431,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0.213233981900981,0,2.51896748360424,1.80016671457988,0,0,0,0,0,1.68380132536469,0.143444410785353,0,0,0,0,0,0,0,0,0,1.00636896795513,0.641136984606466 | ||
|short_description=p39@SEPT9 | |||
}} | }} |
Latest revision as of 18:49, 17 September 2015
Short description: | p39@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_SEPT9_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -14bp_to_uc010wtn.1_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.81e-15 | 4 |
hemolymphoid system gland | 7.81e-15 | 4 |
thymic region | 7.81e-15 | 4 |
pharyngeal gland | 7.81e-15 | 4 |
thymus primordium | 7.81e-15 | 4 |
blood | 3.61e-10 | 15 |
haemolymphatic fluid | 3.61e-10 | 15 |
organism substance | 3.61e-10 | 15 |
pharyngeal epithelium | 6.74e-10 | 6 |
chordate pharynx | 1.05e-08 | 10 |
pharyngeal region of foregut | 1.05e-08 | 10 |
hemopoietic organ | 1.75e-08 | 7 |
immune organ | 1.75e-08 | 7 |
pharynx | 7.03e-08 | 11 |