FFCP PHASE1:Hg19::chr17:75450049..75450060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc010wtn.1_5end | |association_with_transcript=-14bp_to_uc010wtn.1_5end | ||
|cluster_id=chr17:75450049..75450060,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_39_at_SEPT9_5end | |description=CAGE_peak_39_at_SEPT9_5end | ||
|id=chr17:75450049..75450060,+ | |id=chr17:75450049..75450060,+ | ||
|ontology_enrichment_celltype=CL:0000838!9.85e-50!52;CL:0000542!1.72e-48!53;CL:0000051!1.72e-48!53;CL:0000738!7.44e-39!140;CL:0002087!1.07e-37!119;CL:0002031!4.14e-31!124;CL:0000037!1.17e-30!172;CL:0000566!1.17e-30!172;CL:0000084!1.38e-30!25;CL:0000827!1.38e-30!25;CL:0000988!1.06e-28!182;CL:0000791!7.98e-28!18;CL:0000789!7.98e-28!18;CL:0002420!7.98e-28!18;CL:0002419!7.98e-28!18;CL:0000790!7.98e-28!18;CL:0002032!4.61e-26!165;CL:0000837!4.61e-26!165;CL:0000625!1.88e-17!11;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000236!2.12e-10!14;CL:0000624!2.19e-10!6;CL:0002393!2.67e-09!9;CL:0002397!2.67e-09!9 | |ontology_enrichment_celltype=CL:0000838!9.85e-50!52;CL:0000542!1.72e-48!53;CL:0000051!1.72e-48!53;CL:0000738!7.44e-39!140;CL:0002087!1.07e-37!119;CL:0002031!4.14e-31!124;CL:0000037!1.17e-30!172;CL:0000566!1.17e-30!172;CL:0000084!1.38e-30!25;CL:0000827!1.38e-30!25;CL:0000988!1.06e-28!182;CL:0000791!7.98e-28!18;CL:0000789!7.98e-28!18;CL:0002420!7.98e-28!18;CL:0002419!7.98e-28!18;CL:0000790!7.98e-28!18;CL:0002032!4.61e-26!165;CL:0000837!4.61e-26!165;CL:0000625!1.88e-17!11;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000236!2.12e-10!14;CL:0000624!2.19e-10!6;CL:0002393!2.67e-09!9;CL:0002397!2.67e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.59e-62;25!CL:0000791;9.38e-60;18!CL:0000789;9.38e-60;18!CL:0002419;9.38e-60;18!CL:0000625;1.39e-36;11!CL:0000542;1.71e-22;53!CL:0000624;4.11e-21;6!CL:0000898;9.18e-12;3!CL:0000623;6.00e-11;3!CL:0000815;1.63e-08;2!CL:0000792;1.63e-08;2!CL:0002677;1.63e-08;2!CL:0002087;1.30e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.15e-62,25;CL:0000827,4.15e-62,25;CL:0000791,5.04e-60,18;CL:0000789,5.04e-60,18;CL:0002420,5.04e-60,18;CL:0002419,5.04e-60,18;CL:0000790,5.04e-60,18;CL:0000838,7.00e-42,52;CL:0000542,5.89e-41,53;CL:0000051,5.89e-41,53;CL:0000625,7.68e-37,11;CL:0000624,4.15e-21,6;CL:0002087,3.17e-19,115;CL:0000738,1.70e-16,136;CL:0002031,2.59e-15,120;CL:0000037,6.21e-13,168;CL:0000988,6.82e-12,177;CL:0000898,9.06e-12,3;CL:0000623,3.98e-11,3;CL:0000825,3.98e-11,3;CL:0002032,1.25e-10,161;CL:0000837,1.25e-10,161;CL:0000815,1.66e-08,2;CL:0000893,1.66e-08,2;CL:0002489,1.66e-08,2;CL:0000809,1.66e-08,2;CL:0000792,1.66e-08,2;CL:0002677,1.66e-08,2;CL:0000808,1.66e-08,2;CL:0000894,1.66e-08,2;CL:0000806,1.66e-08,2;CL:0000807,1.66e-08,2;CL:0000805,1.66e-08,2;CL:0002425,1.66e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;9.38e-60;18!CL:0000051;1.71e-22;53!CL:0002425;1.78e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.74e-07!10 | |ontology_enrichment_disease=DOID:0060058!7.74e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.50e-10!7;UBERON:0000178!1.67e-10!15;UBERON:0000179!1.67e-10!15;UBERON:0000463!1.67e-10!15;UBERON:0002390!5.58e-10!102;UBERON:0003061!5.58e-10!102;UBERON:0002193!1.11e-09!112;UBERON:0002370!1.50e-07!4;UBERON:0005058!1.50e-07!4;UBERON:0009113!1.50e-07!4;UBERON:0003295!1.50e-07!4;UBERON:0005562!1.50e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!1.50e-10!7;UBERON:0000178!1.67e-10!15;UBERON:0000179!1.67e-10!15;UBERON:0000463!1.67e-10!15;UBERON:0002390!5.58e-10!102;UBERON:0003061!5.58e-10!102;UBERON:0002193!1.11e-09!112;UBERON:0002370!1.50e-07!4;UBERON:0005058!1.50e-07!4;UBERON:0009113!1.50e-07!4;UBERON:0003295!1.50e-07!4;UBERON:0005562!1.50e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.71e-10;15!UBERON:0000179;2.71e-10;15!UBERON:0000463;2.71e-10;15!UBERON:0002370;7.76e-08;2!UBERON:0005058;7.76e-08;2!UBERON:0009113;7.76e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.81e-15,4;UBERON:0005058,7.81e-15,4;UBERON:0009113,7.81e-15,4;UBERON:0003295,7.81e-15,4;UBERON:0005562,7.81e-15,4;UBERON:0000178,3.61e-10,15;UBERON:0000179,3.61e-10,15;UBERON:0000463,3.61e-10,15;UBERON:0003351,6.74e-10,6;UBERON:0001042,1.05e-08,10;UBERON:0009145,1.05e-08,10;UBERON:0004177,1.75e-08,7;UBERON:0005057,1.75e-08,7;UBERON:0006562,7.03e-08,11 | |||
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|short_description=p39@SEPT9 | |short_description=p39@SEPT9 | ||
}} | }} |
Latest revision as of 18:49, 17 September 2015
Short description: | p39@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_SEPT9_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -14bp_to_uc010wtn.1_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.81e-15 | 4 |
hemolymphoid system gland | 7.81e-15 | 4 |
thymic region | 7.81e-15 | 4 |
pharyngeal gland | 7.81e-15 | 4 |
thymus primordium | 7.81e-15 | 4 |
blood | 3.61e-10 | 15 |
haemolymphatic fluid | 3.61e-10 | 15 |
organism substance | 3.61e-10 | 15 |
pharyngeal epithelium | 6.74e-10 | 6 |
chordate pharynx | 1.05e-08 | 10 |
pharyngeal region of foregut | 1.05e-08 | 10 |
hemopoietic organ | 1.75e-08 | 7 |
immune organ | 1.75e-08 | 7 |
pharynx | 7.03e-08 | 11 |