FFCP PHASE1:Hg19::chr3:21584244..21584260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41136 | |HGNC=41136 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000412369_5end | |||
|cluster_id=chr3:21584244..21584260,+ | |||
|coexpression_cluster_id=C4321 | |||
|description=CAGE_peak_1_at_ZNF385D-AS1_5end | |||
|id=chr3:21584244..21584260,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.24e-24!5;CL:0000039!1.11e-11!7;CL:0000586!1.11e-11!7;CL:0000540!1.06e-07!6;CL:0000031!1.06e-07!6;CL:0000404!1.06e-07!6;CL:0000763!3.36e-07!112;CL:0000049!3.36e-07!112;CL:0002178!6.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.33e-45;5!CL:0000039;2.07e-21;7!CL:0000586;2.07e-21;7!CL:0002321;5.02e-15;15!CL:0000148;1.42e-08;10!CL:0000540;6.78e-07;6!CL:0000404;6.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.29e-45,5;CL:0000039,2.36e-21,7;CL:0000586,2.36e-21,7;CL:0000148,1.37e-08,10;CL:0000541,1.37e-08,10;CL:0000540,7.09e-07,6;CL:0000031,7.09e-07,6;CL:0000404,7.09e-07,6;CL:0000763,8.74e-07,108;CL:0000049,8.74e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.58e-15;10!UBERON:0005564;4.58e-15;10!CL:0000031;6.78e-07;6 | |||
|ontology_enrichment_disease=DOID:8692!1.74e-23!31;DOID:1036!4.17e-21!8;DOID:1240!4.77e-21!39;DOID:2531!3.01e-20!51;DOID:0060083!3.01e-20!51;DOID:0050686!4.54e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.53e-28;31!DOID:1240;2.20e-20;39!DOID:1036;5.21e-11;8!DOID:2531;8.39e-11;51!DOID:0060083;8.39e-11;51!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.43e-27,31;DOID:1240,1.26e-21,39;DOID:2531,3.39e-16,51;DOID:0060083,3.39e-16,51;DOID:1036,5.30e-11,8;DOID:3095,1.89e-10,22;DOID:2994,1.89e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.45e-21!8;UBERON:0003135!2.35e-15!11;UBERON:0000991!9.68e-08!21;UBERON:0009196!9.68e-08!21;UBERON:0009117!9.68e-08!21;UBERON:0005564!9.68e-08!21;UBERON:0004176!2.33e-07!22;UBERON:0003101!2.33e-07!22;UBERON:0000079!2.33e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.06e-19;8!UBERON:0003135;1.02e-13;11!UBERON:0000922;6.04e-09;49!UBERON:0000991;2.94e-07;21!UBERON:0003101;6.21e-07;22!UBERON:0000079;6.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.02e-18,8;UBERON:0003135,1.11e-13,11;UBERON:0000991,3.06e-07,21;UBERON:0009196,3.06e-07,21;UBERON:0009117,3.06e-07,21;UBERON:0005564,3.06e-07,21;UBERON:0004176,6.46e-07,22;UBERON:0003101,6.46e-07,22;UBERON:0000079,6.46e-07,22 | |||
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|short_description=p1@ZNF385D-AS1 | |||
}} | }} |
Latest revision as of 18:52, 17 September 2015
Short description: | p1@ZNF385D-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF385D-AS1_5end |
Coexpression cluster: | C4321_teratocarcinoma_testicular_acute_chronic_H9_iPS_adult |
Association with transcript: | -47bp_to_ENST00000412369_5end |
EntrezGene: | NA |
HGNC: | 41136 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.29e-45 | 5 |
germ line cell | 2.36e-21 | 7 |
germ cell | 2.36e-21 | 7 |
melanocyte | 1.37e-08 | 10 |
melanoblast | 1.37e-08 | 10 |
neuron | 7.09e-07 | 6 |
neuroblast | 7.09e-07 | 6 |
electrically signaling cell | 7.09e-07 | 6 |
myeloid cell | 8.74e-07 | 108 |
common myeloid progenitor | 8.74e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
testis | 1.02e-18 | 8 |
male reproductive organ | 1.11e-13 | 11 |
gonad | 3.06e-07 | 21 |
indifferent external genitalia | 3.06e-07 | 21 |
indifferent gonad | 3.06e-07 | 21 |
gonad primordium | 3.06e-07 | 21 |
external genitalia | 6.46e-07 | 22 |
male organism | 6.46e-07 | 22 |
male reproductive system | 6.46e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.43e-27 | 31 |
leukemia | 1.26e-21 | 39 |
hematologic cancer | 3.39e-16 | 51 |
immune system cancer | 3.39e-16 | 51 |
chronic leukemia | 5.30e-11 | 8 |
germ cell and embryonal cancer | 1.89e-10 | 22 |
germ cell cancer | 1.89e-10 | 22 |