FFCP PHASE1:Hg19::chr12:21556577..21556599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6579 | |EntrezGene=6579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10956 | |HGNC=10956 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUW6,C9JTF6 | |UniProt=C9JUW6,C9JTF6 | ||
|association_with_transcript=0bp_to_ENST00000450590,ENST00000453443_5end | |association_with_transcript=0bp_to_ENST00000450590,ENST00000453443_5end | ||
|cluster_id=chr12:21556577..21556599,- | |||
|description=CAGE_peak_5_at_SLCO1A2_5end | |description=CAGE_peak_5_at_SLCO1A2_5end | ||
|id=chr12:21556577..21556599,- | |id=chr12:21556577..21556599,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.48e-40;1!CL:0000322;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.22e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.70e-40;1!UBERON:0003056;1.31e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;3.44e-21;2!DOID:3908;2.63e-09;5!DOID:1325;5.23e-07;7!DOID:3904;5.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.11e-21,2;DOID:3908,2.53e-09,5;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
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|short_description=p5@SLCO1A2 | |short_description=p5@SLCO1A2 | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p5@SLCO1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLCO1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450590, ENST00000453443_5end |
EntrezGene: | SLCO1A2 |
HGNC: | 10956 |
UniProt: | C9JUW6C9JTF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.30e-40 | 1 |
cheek | 3.30e-40 | 1 |
parotid gland primordium | 3.30e-40 | 1 |
bronchoalveolar duct junction | 3.11e-21 | 2 |
alveolar duct | 3.11e-21 | 2 |
bronchiole | 3.11e-21 | 2 |
major salivary gland | 6.96e-21 | 2 |
midface | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 1.22e-14 | 3 |
alveolus | 1.22e-14 | 3 |
pulmonary lobule | 1.22e-14 | 3 |
lobule | 1.22e-14 | 3 |
alveolus of lung | 1.22e-14 | 3 |
alveolar system | 1.22e-14 | 3 |
pulmonary acinus | 1.22e-14 | 3 |
alveolar sac | 1.22e-14 | 3 |
alveolar wall | 1.22e-14 | 3 |
adrenal gland | 1.83e-14 | 3 |
adrenal cortex | 1.83e-14 | 3 |
adrenal/interrenal gland | 1.83e-14 | 3 |
face | 3.27e-08 | 22 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
saliva-secreting gland | 7.25e-08 | 6 |
gland of oral region | 7.25e-08 | 6 |
gland of foregut | 7.25e-08 | 6 |
oral gland | 7.25e-08 | 6 |
oral cavity | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.11e-21 | 2 |
non-small cell lung carcinoma | 2.53e-09 | 5 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |