FFCP PHASE1:Hg19::chr15:45694380..45694430,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2628 | |EntrezGene=2628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4175 | |HGNC=4175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000561148_5end | |association_with_transcript=0bp_to_ENST00000561148_5end | ||
|cluster_id=chr15:45694380..45694430,- | |||
|description=CAGE_peak_2_at_GATM_5end | |description=CAGE_peak_2_at_GATM_5end | ||
|id=chr15:45694380..45694430,- | |id=chr15:45694380..45694430,- | ||
|ontology_enrichment_celltype=CL:0000988!7.35e-22!182;CL:0000738!2.09e-21!140;CL:0000037!8.78e-20!172;CL:0000566!8.78e-20!172;CL:0002031!3.01e-19!124;CL:0002032!1.67e-18!165;CL:0000837!1.67e-18!165;CL:0002087!2.52e-18!119;CL:0000838!1.14e-16!52;CL:0000542!1.33e-16!53;CL:0000051!1.33e-16!53;CL:0000945!9.25e-11!24;CL:0000826!9.25e-11!24 | |ontology_enrichment_celltype=CL:0000988!7.35e-22!182;CL:0000738!2.09e-21!140;CL:0000037!8.78e-20!172;CL:0000566!8.78e-20!172;CL:0002031!3.01e-19!124;CL:0002032!1.67e-18!165;CL:0000837!1.67e-18!165;CL:0002087!2.52e-18!119;CL:0000838!1.14e-16!52;CL:0000542!1.33e-16!53;CL:0000051!1.33e-16!53;CL:0000945!9.25e-11!24;CL:0000826!9.25e-11!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.88e-15;24!CL:0000542;4.40e-14;53!CL:0002393;2.06e-10;6!CL:0002397;2.06e-10;6!CL:0000624;2.77e-10;6!CL:0000084;5.74e-07;25 | |ontology_enrichment_celltype_v019=CL:0000945;9.88e-15;24!CL:0000542;4.40e-14;53!CL:0002393;2.06e-10;6!CL:0002397;2.06e-10;6!CL:0000624;2.77e-10;6!CL:0000084;5.74e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.01e-24,52;CL:0000542,2.23e-23,53;CL:0000051,2.23e-23,53;CL:0000738,5.48e-22,136;CL:0002087,3.20e-21,115;CL:0002031,6.56e-21,120;CL:0000988,1.16e-18,177;CL:0000037,2.77e-16,168;CL:0002032,5.27e-16,161;CL:0000837,5.27e-16,161;CL:0000945,1.90e-15,24;CL:0000826,1.90e-15,24;CL:0000624,1.16e-10,6;CL:0000084,4.38e-07,25;CL:0000827,4.38e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;4.40e-14;53 | |ontology_enrichment_development_v019=CL:0000051;4.40e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.30e-10!57;UBERON:0005068!5.30e-10!57;UBERON:0006241!5.30e-10!57;UBERON:0007135!5.30e-10!57;UBERON:0002616!5.83e-08!59;UBERON:0002780!2.43e-07!41;UBERON:0001890!2.43e-07!41;UBERON:0006240!2.43e-07!41;UBERON:0000955!5.00e-07!69;UBERON:0006238!5.00e-07!69;UBERON:0003080!7.64e-07!42;UBERON:0002405!8.15e-07!115 | |ontology_enrichment_uberon=UBERON:0001049!5.30e-10!57;UBERON:0005068!5.30e-10!57;UBERON:0006241!5.30e-10!57;UBERON:0007135!5.30e-10!57;UBERON:0002616!5.83e-08!59;UBERON:0002780!2.43e-07!41;UBERON:0001890!2.43e-07!41;UBERON:0006240!2.43e-07!41;UBERON:0000955!5.00e-07!69;UBERON:0006238!5.00e-07!69;UBERON:0003080!7.64e-07!42;UBERON:0002405!8.15e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.99e-07;53!UBERON:0002616;4.99e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0000073;4.99e-07;53!UBERON:0002616;4.99e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.66e-10,56;UBERON:0005068,3.66e-10,56;UBERON:0006241,3.66e-10,56;UBERON:0007135,3.66e-10,56;UBERON:0000073,5.83e-10,53;UBERON:0002616,5.83e-10,53;UBERON:0000955,5.56e-07,68;UBERON:0006238,5.56e-07,68 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0.85870796139317,0.821246550437305,0.376627918784408,2.06316195519468,1.72411237844886,2.20390187678302,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0.739508020333575,2.01414721508784,1.42169232487422,0.293600439334847,1.66198622559563,1.20326668482085,2.38711957787437,0,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0.512321413058201,0,0.689491361473237,0.645484683583826,1.35426486594342,0.188242339542605,0,0.449446968890169,1.22433556948361,1.28371610830437,0.639337125799041,0,0.797854630486527,2.55734850319616,1.16083695451434,0,0,0.502497330513487,0,1.52032191293582,0,0.368277635987565,0,2.11255286311942,5.52771179909113,3.56419697364239,1.46027220490444,0.901061357049038,0.48217676009124,0.285012743741249,0.99458338599545,0.547992461293902,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,0.574752439954483,1.98313461835459,0.954053754535364,1.70763890732835,1.17447437874188,1.91136614062614,0,1.12101712596307,0,2.9506465517075,1.57204305099666,2.05601498999509,0.83593247695339,2.28145586643513,0.946895611469467,1.94826728407911,0.557052284425868,1.76763544484902,1.10766947291811,0.812411591295047,0.640456598628376,0.910415432919148,0.657751618414705,0.276350017785848,0.289803085735052,1.33457906845854,0.535081656179426,1.04535523804977,0.226618685395132,4.21542542962113,1.03088233644789,1.01207876807801,0.318565414324097,0.651083453856419,0,0.451725357233318,0.383959833463255,0,0,0,2.41928091869679,1.33720097891754,0.868946423296794,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.263504357079378,2.5540919722054,0.728590576585084,0,0.649094787309367,0.348259474598534,0.398873881556595,0.238490624305342,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,0,0,0.419499436209906,0,0,0,1.06729878806013,1.33888245105868,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0,0.225222960966644,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0.302714855289863,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.552299391853796,0.80823028409406,0.355009592516614,0,0.67824236924195,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,2.21446636387394,1.40241773803446,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.882926198829301,4.18160691046586,0,0,0,0.502644862058154,0.185176890317059,0,0,0,0.231860809950154,0,0.433099343283221,0.925971025153221,0.190254152234598,0.790204397959275,2.57545848628462,0.246217006087397,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0.626909658919938,0,0,1.97065295158377,0.528290604079356,0.207328115540772,1.00883967391873,0.6312121671319,0.126995788584338,0.381988425558278,1.17217447210047,0,0.411309970813294,0.300343057843917,0,0.224262168690721,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,1.2162378064119,2.00902836572851,2.10833939483032,0.479249710983165,1.14861935834114,0,0.434343920002738,0.410952645100767,0.179060963239896,0.784596007954691,2.1673383622212,3.23441362289276,3.33691894327346,0,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0.587403472388222,1.02943027143257,1.24060815673732,1.50999940573032,0.213455115606889,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,2.53804844142407,0.601519410909855,0.460404944679482,0.229628896329213,0.182091168006717,0.131124414959424,0.902399225814824,0.385076685522074,0,0,0,0,0.510281115829547,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0,0.877039506583738,0.784306353074702,0,0,0,2.88514832613622,0.183138929636687,0.330037999682352,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0.145016693914229,0,0,0.826424576804891,0.384380134730212,0.510450849978337,0.2023155617111,0,0,1.3940745403212,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.190630193923825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| ||
|short_description=p2@GATM | |short_description=p2@GATM | ||
}} | }} |
Latest revision as of 20:03, 17 September 2015
Short description: | p2@GATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000561148_5end |
EntrezGene: | GATM |
HGNC: | 4175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.01e-24 | 52 |
lymphocyte | 2.23e-23 | 53 |
common lymphoid progenitor | 2.23e-23 | 53 |
leukocyte | 5.48e-22 | 136 |
nongranular leukocyte | 3.20e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 6.56e-21 | 120 |
hematopoietic cell | 1.16e-18 | 177 |
hematopoietic stem cell | 2.77e-16 | 168 |
hematopoietic oligopotent progenitor cell | 5.27e-16 | 161 |
hematopoietic multipotent progenitor cell | 5.27e-16 | 161 |
lymphocyte of B lineage | 1.90e-15 | 24 |
pro-B cell | 1.90e-15 | 24 |
CD4-positive, alpha-beta T cell | 1.16e-10 | 6 |
T cell | 4.38e-07 | 25 |
pro-T cell | 4.38e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.66e-10 | 56 |
neural rod | 3.66e-10 | 56 |
future spinal cord | 3.66e-10 | 56 |
neural keel | 3.66e-10 | 56 |
regional part of nervous system | 5.83e-10 | 53 |
regional part of brain | 5.83e-10 | 53 |
brain | 5.56e-07 | 68 |
future brain | 5.56e-07 | 68 |