FFCP PHASE1:Hg19::chr9:75568244..75568266,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:75568244..75568266,-
|short_description=p9@ALDH1A1
|description=CAGE_peak_9_at_ALDH1A1_5end
|association_with_transcript=-11bp_to_NM_000689_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=216 | |EntrezGene=216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=402 | |HGNC=402 | ||
|TSSclassifier=strong | |||
|UniProt=P00352 | |UniProt=P00352 | ||
|association_with_transcript=-11bp_to_NM_000689_5end | |||
|cluster_id=chr9:75568244..75568266,- | |||
|description=CAGE_peak_9_at_ALDH1A1_5end | |||
|id=chr9:75568244..75568266,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;1.78e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.05e-50;3!UBERON:0009117;1.07e-07;10!UBERON:0005564;1.07e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-24!115;UBERON:0004733!3.92e-09!12;UBERON:0002028!3.92e-09!12;UBERON:0007277!3.92e-09!12;UBERON:0003076!4.37e-09!15;UBERON:0003057!4.37e-09!15;UBERON:0004732!2.42e-08!13;UBERON:0003101!6.00e-08!22;UBERON:0000079!6.00e-08!22;UBERON:0002680!9.48e-07!9;UBERON:0001895!9.48e-07!9;UBERON:0010092!9.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.08e-33;2!UBERON:0002037;1.24e-25;6!UBERON:0003296;2.10e-17;4!UBERON:0010133;2.10e-17;4!UBERON:0002680;2.47e-17;9!UBERON:0001895;2.47e-17;9!UBERON:0004733;3.62e-13;12!UBERON:0002028;3.62e-13;12!UBERON:0004732;3.33e-12;13!UBERON:0001894;2.29e-10;7!UBERON:0000473;2.11e-09;8!UBERON:0003101;1.98e-07;22!UBERON:0000079;1.98e-07;22!UBERON:0003135;4.50e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.10e-34,2;UBERON:0002037,1.30e-25,6;UBERON:0006215,1.30e-25,6;UBERON:0003296,1.71e-17,4;UBERON:0010133,1.71e-17,4;UBERON:0002680,2.54e-17,9;UBERON:0001895,2.54e-17,9;UBERON:0010092,2.54e-17,9;UBERON:0004733,3.69e-13,12;UBERON:0002028,3.69e-13,12;UBERON:0007277,3.69e-13,12;UBERON:0004732,3.39e-12,13;UBERON:0003076,1.19e-10,15;UBERON:0003057,1.19e-10,15;UBERON:0001894,2.04e-10,7;UBERON:0006222,2.04e-10,7;UBERON:0000473,2.16e-09,8;UBERON:0000073,9.70e-08,53;UBERON:0002616,9.70e-08,53;UBERON:0003101,1.94e-07,22;UBERON:0000079,1.94e-07,22;UBERON:0001049,2.49e-07,56;UBERON:0005068,2.49e-07,56;UBERON:0006241,2.49e-07,56;UBERON:0007135,2.49e-07,56;UBERON:0003135,4.57e-07,11;UBERON:0007023,9.31e-07,114 | |||
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| ||
|short_description=p9@ALDH1A1 | |||
}} | }} |
Latest revision as of 20:13, 17 September 2015
Short description: | p9@ALDH1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ALDH1A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_NM_000689_5end |
EntrezGene: | ALDH1A1 |
HGNC: | 402 |
UniProt: | P00352 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.10e-34 | 2 |
cerebellum | 1.30e-25 | 6 |
rhombic lip | 1.30e-25 | 6 |
gland of diencephalon | 1.71e-17 | 4 |
neuroendocrine gland | 1.71e-17 | 4 |
regional part of metencephalon | 2.54e-17 | 9 |
metencephalon | 2.54e-17 | 9 |
future metencephalon | 2.54e-17 | 9 |
segmental subdivision of hindbrain | 3.69e-13 | 12 |
hindbrain | 3.69e-13 | 12 |
presumptive hindbrain | 3.69e-13 | 12 |
segmental subdivision of nervous system | 3.39e-12 | 13 |
posterior neural tube | 1.19e-10 | 15 |
chordal neural plate | 1.19e-10 | 15 |
diencephalon | 2.04e-10 | 7 |
future diencephalon | 2.04e-10 | 7 |
testis | 2.16e-09 | 8 |
regional part of nervous system | 9.70e-08 | 53 |
regional part of brain | 9.70e-08 | 53 |
male organism | 1.94e-07 | 22 |
male reproductive system | 1.94e-07 | 22 |
neural tube | 2.49e-07 | 56 |
neural rod | 2.49e-07 | 56 |
future spinal cord | 2.49e-07 | 56 |
neural keel | 2.49e-07 | 56 |
male reproductive organ | 4.57e-07 | 11 |
adult organism | 9.31e-07 | 114 |