FFCP PHASE1:Hg19::chr1:36851490..36851533,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:36851490..36851533,-
|short_description=p1@STK40
|description=CAGE_peak_1_at_STK40_5end
|association_with_transcript=0bp_to_ENST00000373132_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83931 | |EntrezGene=83931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21373 | |HGNC=21373 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2I9 | |UniProt=Q8N2I9 | ||
|association_with_transcript=0bp_to_ENST00000373132_5end | |||
|cluster_id=chr1:36851490..36851533,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_STK40_5end | |||
|id=chr1:36851490..36851533,- | |||
|ontology_enrichment_celltype=CL:0000763!1.68e-24!112;CL:0000049!1.68e-24!112;CL:0002032!2.71e-24!165;CL:0000837!2.71e-24!165;CL:0000766!3.39e-24!76;CL:0000037!3.41e-24!172;CL:0000566!3.41e-24!172;CL:0000988!7.39e-24!182;CL:0002057!6.51e-23!42;CL:0000738!2.17e-22!140;CL:0000557!1.53e-21!71;CL:0002009!1.78e-21!65;CL:0002194!1.31e-20!63;CL:0000576!1.31e-20!63;CL:0000040!1.31e-20!63;CL:0000559!1.31e-20!63;CL:0000839!5.35e-20!70;CL:0000860!7.78e-20!45;CL:0002031!2.62e-19!124;CL:0002087!4.07e-19!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-19;33!CL:0002057;6.02e-19;33!CL:0000473;7.73e-18;39!CL:0000234;7.73e-18;39!CL:0000576;7.99e-15;48!CL:0000766;2.40e-12;69!CL:0000763;2.10e-09;100!CL:0002087;8.21e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.18e-27,72;CL:0000763,8.24e-27,108;CL:0000049,8.24e-27,108;CL:0002032,4.63e-26,161;CL:0000837,4.63e-26,161;CL:0000037,6.53e-26,168;CL:0000988,1.78e-25,177;CL:0000473,2.35e-25,48;CL:0000234,2.35e-25,48;CL:0002009,1.35e-24,61;CL:0000557,1.82e-24,67;CL:0000738,2.96e-24,136;CL:0002194,1.05e-23,59;CL:0000576,1.05e-23,59;CL:0000040,1.05e-23,59;CL:0000559,1.05e-23,59;CL:0000860,6.51e-23,42;CL:0002057,6.51e-23,42;CL:0000839,8.44e-23,66;CL:0002031,3.89e-21,120;CL:0002087,5.53e-21,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-17;42!CL:0000049;2.10e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-21!102;UBERON:0003061!2.11e-21!102;UBERON:0002193!5.19e-21!112;UBERON:0002405!1.15e-20!115;UBERON:0001474!1.23e-18!86;UBERON:0002371!4.40e-18!80;UBERON:0004765!3.28e-12!101;UBERON:0001434!3.28e-12!101;UBERON:0003081!1.30e-10!216;UBERON:0007023!4.88e-09!115;UBERON:0005172!2.79e-07!55;UBERON:0005173!2.79e-07!55;UBERON:0005177!8.27e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-23,98;UBERON:0003061,1.21e-23,98;UBERON:0002193,4.36e-23,108;UBERON:0001474,6.24e-21,82;UBERON:0002371,1.90e-20,76;UBERON:0002405,1.91e-19,93;UBERON:0004765,5.95e-15,90;UBERON:0001434,2.45e-12,100;UBERON:0003081,1.90e-10,203;UBERON:0007023,4.09e-09,114;UBERON:0005177,7.07e-08,101;UBERON:0005172,3.27e-07,54;UBERON:0005173,3.27e-07,54 | |||
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|short_description=p1@STK40 | |||
}} | }} |
Latest revision as of 21:03, 17 September 2015
Short description: | p1@STK40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STK40_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000373132_5end |
EntrezGene: | STK40 |
HGNC: | 21373 |
UniProt: | Q8N2I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.18e-27 | 72 |
myeloid cell | 8.24e-27 | 108 |
common myeloid progenitor | 8.24e-27 | 108 |
hematopoietic oligopotent progenitor cell | 4.63e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.63e-26 | 161 |
hematopoietic stem cell | 6.53e-26 | 168 |
hematopoietic cell | 1.78e-25 | 177 |
defensive cell | 2.35e-25 | 48 |
phagocyte | 2.35e-25 | 48 |
macrophage dendritic cell progenitor | 1.35e-24 | 61 |
granulocyte monocyte progenitor cell | 1.82e-24 | 67 |
leukocyte | 2.96e-24 | 136 |
monopoietic cell | 1.05e-23 | 59 |
monocyte | 1.05e-23 | 59 |
monoblast | 1.05e-23 | 59 |
promonocyte | 1.05e-23 | 59 |
classical monocyte | 6.51e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-23 | 42 |
myeloid lineage restricted progenitor cell | 8.44e-23 | 66 |
hematopoietic lineage restricted progenitor cell | 3.89e-21 | 120 |
nongranular leukocyte | 5.53e-21 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-23 | 98 |
blood island | 1.21e-23 | 98 |
hemolymphoid system | 4.36e-23 | 108 |
bone element | 6.24e-21 | 82 |
bone marrow | 1.90e-20 | 76 |
immune system | 1.91e-19 | 93 |
skeletal element | 5.95e-15 | 90 |
skeletal system | 2.45e-12 | 100 |
lateral plate mesoderm | 1.90e-10 | 203 |
adult organism | 4.09e-09 | 114 |
trunk region element | 7.07e-08 | 101 |
abdomen element | 3.27e-07 | 54 |
abdominal segment element | 3.27e-07 | 54 |