FFCP PHASE1:Hg19::chr1:158324726..158324737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_AK310567_5end | |association_with_transcript=-105bp_to_AK310567_5end | ||
|cluster_id=chr1:158324726..158324737,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_11_at_CD1E_5end | |description=CAGE_peak_11_at_CD1E_5end | ||
|id=chr1:158324726..158324737,+ | |id=chr1:158324726..158324737,+ | ||
|ontology_enrichment_celltype=CL:0000990!1.15e-09!8;CL:0000451!4.49e-08!10 | |ontology_enrichment_celltype=CL:0000990!1.15e-09!8;CL:0000451!4.49e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.50e-07,25;CL:0000827,2.50e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.30e-21;2!UBERON:0004872;6.21e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.91e-26!7;UBERON:0002370!3.82e-21!4;UBERON:0005058!3.82e-21!4;UBERON:0009113!3.82e-21!4;UBERON:0003295!3.82e-21!4;UBERON:0005562!3.82e-21!4;UBERON:0000974!1.07e-18!10;UBERON:0003351!1.90e-14!6;UBERON:0000341!3.02e-11!2;UBERON:0003408!4.75e-09!10;UBERON:0001042!4.75e-09!10;UBERON:0009145!4.75e-09!10;UBERON:0006562!2.62e-08!11;UBERON:0009722!2.62e-08!11;UBERON:0007690!2.62e-08!11;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3;UBERON:0005057!1.49e-07!26 | |ontology_enrichment_uberon=UBERON:0004177!2.91e-26!7;UBERON:0002370!3.82e-21!4;UBERON:0005058!3.82e-21!4;UBERON:0009113!3.82e-21!4;UBERON:0003295!3.82e-21!4;UBERON:0005562!3.82e-21!4;UBERON:0000974!1.07e-18!10;UBERON:0003351!1.90e-14!6;UBERON:0000341!3.02e-11!2;UBERON:0003408!4.75e-09!10;UBERON:0001042!4.75e-09!10;UBERON:0009145!4.75e-09!10;UBERON:0006562!2.62e-08!11;UBERON:0009722!2.62e-08!11;UBERON:0007690!2.62e-08!11;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3;UBERON:0005057!1.49e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.28e-79;2!UBERON:0005058;1.28e-79;2!UBERON:0009113;1.28e-79;2!UBERON:0004177;1.14e-32;5!UBERON:0005057;1.14e-32;5!UBERON:0000077;6.53e-07;27!UBERON:0002405;6.53e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0003351,1.82e-27,6;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000974,5.90e-17,10;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19 | |||
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|short_description=p11@CD1E | |short_description=p11@CD1E | ||
}} | }} |
Latest revision as of 21:08, 17 September 2015
Short description: | p11@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -105bp_to_AK310567_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.50e-07 | 25 |
pro-T cell | 2.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.48e-40 | 4 |
hemolymphoid system gland | 1.48e-40 | 4 |
thymic region | 1.48e-40 | 4 |
pharyngeal gland | 1.48e-40 | 4 |
thymus primordium | 1.48e-40 | 4 |
pharyngeal epithelium | 1.82e-27 | 6 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
neck | 5.90e-17 | 10 |
gland of gut | 5.90e-17 | 10 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |