FFCP PHASE1:Hg19::chr12:25055949..25056088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=586 | |EntrezGene=586 | ||
| Line 8: | Line 8: | ||
|UniProt=F5H5E4,B7Z2M5,P54687 | |UniProt=F5H5E4,B7Z2M5,P54687 | ||
|association_with_transcript=0bp_to_ENST00000539282,NM_001178093,uc010six.1_5end | |association_with_transcript=0bp_to_ENST00000539282,NM_001178093,uc010six.1_5end | ||
|cluster_id=chr12:25055949..25056088,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_2_at_BCAT1_5end | |description=CAGE_peak_2_at_BCAT1_5end | ||
Latest revision as of 22:01, 17 September 2015
| Short description: | p2@BCAT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_BCAT1_5end |
| Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
| Association with transcript: | 0bp_to_ENST00000539282, NM_001178093, uc010six.1_5end |
| EntrezGene: | BCAT1 |
| HGNC: | 976 |
| UniProt: | F5H5E4B7Z2M5P54687 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@BCAT1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.86e-29 | 48 |
| phagocyte | 1.86e-29 | 48 |
| monopoietic cell | 9.79e-28 | 59 |
| monocyte | 9.79e-28 | 59 |
| monoblast | 9.79e-28 | 59 |
| promonocyte | 9.79e-28 | 59 |
| macrophage dendritic cell progenitor | 1.59e-26 | 61 |
| myeloid leukocyte | 1.58e-25 | 72 |
| classical monocyte | 1.64e-25 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.64e-25 | 42 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| skeletal system | 2.51e-21 | 100 |
| immune system | 3.40e-21 | 93 |
| bone marrow | 3.54e-21 | 76 |
| skeletal element | 7.39e-19 | 90 |
| hemolymphoid system | 1.12e-18 | 108 |
| bone element | 3.59e-18 | 82 |
| hematopoietic system | 1.96e-16 | 98 |
| blood island | 1.96e-16 | 98 |
| embryonic structure | 4.75e-16 | 564 |
| embryo | 1.50e-15 | 592 |
Showing 1 to 10 of 59 entries
