FFCP PHASE1:Hg19::chr11:3819280..3819289,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27315 | |EntrezGene=27315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17893 | |HGNC=17893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000532017_5end | |association_with_transcript=61bp_to_ENST00000532017_5end | ||
|cluster_id=chr11:3819280..3819289,+ | |||
|description=CAGE_peak_7_at_PGAP2_5end | |description=CAGE_peak_7_at_PGAP2_5end | ||
|id=chr11:3819280..3819289,+ | |id=chr11:3819280..3819289,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;9.92e-18;3!CL:0002567;1.94e-17;3!CL:0000094;1.14e-14;8!CL:0000081;7.85e-11;11!CL:0000771;1.70e-07;2 | |ontology_enrichment_celltype_v019=CL:0000775;9.92e-18;3!CL:0002567;1.94e-17;3!CL:0000094;1.14e-14;8!CL:0000081;7.85e-11;11!CL:0000771;1.70e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.18e-17,3;CL:0002567,2.50e-17,3;CL:0000094,1.40e-14,8;CL:0000081,9.13e-11,11;CL:0000771,1.99e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.31e-33;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.31e-33;29 | ||
|ontology_enrichment_disease=DOID:162!4.46e-09!235;DOID:14566!7.24e-09!239;DOID:0050687!1.97e-08!143;DOID:305!1.76e-07!106 | |ontology_enrichment_disease=DOID:162!4.46e-09!235;DOID:14566!7.24e-09!239;DOID:0050687!1.97e-08!143;DOID:305!1.76e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.73e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.05e-11!9 | |ontology_enrichment_uberon=UBERON:0001737!1.05e-11!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.22e-110;9!UBERON:0001557;6.22e-110;9!UBERON:0000072;2.12e-24;37!UBERON:0000065;1.49e-20;44!UBERON:0001004;7.98e-11;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.22e-110;9!UBERON:0001557;6.22e-110;9!UBERON:0000072;2.12e-24;37!UBERON:0000065;1.49e-20;44!UBERON:0001004;7.98e-11;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.21e-110,9;UBERON:0001557,9.43e-52,19;UBERON:0008947,1.84e-25,38;UBERON:0003258,1.84e-25,38;UBERON:0000072,2.06e-20,47;UBERON:0000065,1.21e-17,54;UBERON:0001004,1.31e-12,74;UBERON:0001041,1.43e-10,87;UBERON:0004921,1.92e-07,118 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,0,0,0,0.919421224478927,0.30120591877825,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,0,0.526768169550154,0.393419540227666,0.786021525498329,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0,0.130979075497713,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,1.53798840051797,1.51726221070292,1.92808823906786,1.7647035637183,1.08939722046203,2.13543557199987,2.29213223872279,1.76599318612811,1.53898862778556,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0.381988425558278,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.128343036279748,0,0,0,0,0.637938751653163,0.749007023947182,2.99161459204025,1.24324654030811,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.171986032471617,0.580537987734511,0.219267951258557,0.410577285266046,0,0,0,0,0.19871461170299,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.196854963029498,0.169346664131569,0,0,0.321506296930038,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.37494122388632,0,0,0,0,0.579684114443301,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0.368211900503681,0.139879507719444,0,0.127894371303652,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0.316027223465453,0,0,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,0,0,0,0.919421224478927,0.30120591877825,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,0,0.526768169550154,0.393419540227666,0.786021525498329,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0,0.130979075497713,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,1.53798840051797,1.51726221070292,1.92808823906786,1.7647035637183,1.08939722046203,2.13543557199987,2.29213223872279,1.76599318612811,1.53898862778556,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0.381988425558278,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.128343036279748,0,0,0,0,0.637938751653163,0.749007023947182,2.99161459204025,1.24324654030811,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.171986032471617,0.580537987734511,0.219267951258557,0.410577285266046,0,0,0,0,0.19871461170299,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.196854963029498,0.169346664131569,0,0,0.321506296930038,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.37494122388632,0,0,0,0,0.579684114443301,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0.368211900503681,0.139879507719444,0,0.127894371303652,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0.316027223465453,0,0,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@PGAP2 | |short_description=p7@PGAP2 | ||
}} | }} |
Latest revision as of 22:12, 17 September 2015
Short description: | p7@PGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PGAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000532017_5end |
EntrezGene: | PGAP2 |
HGNC: | 17893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.18e-17 | 3 |
light melanocyte | 2.50e-17 | 3 |
granulocyte | 1.40e-14 | 8 |
blood cell | 9.13e-11 | 11 |
eosinophil | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.21e-110 | 9 |
upper respiratory tract | 9.43e-52 | 19 |
respiratory primordium | 1.84e-25 | 38 |
endoderm of foregut | 1.84e-25 | 38 |
segment of respiratory tract | 2.06e-20 | 47 |
respiratory tract | 1.21e-17 | 54 |
respiratory system | 1.31e-12 | 74 |
foregut | 1.43e-10 | 87 |
subdivision of digestive tract | 1.92e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.73e-08 | 106 |