FFCP PHASE1:Hg19::chr11:394263..394275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11187 | |EntrezGene=11187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9025 | |HGNC=9025 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK71 | |UniProt=E9PK71 | ||
|association_with_transcript=20bp_to_ENST00000531857,ENST00000533069_5end | |association_with_transcript=20bp_to_ENST00000531857,ENST00000533069_5end | ||
|cluster_id=chr11:394263..394275,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_5_at_PKP3_5end | |description=CAGE_peak_5_at_PKP3_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.56e-37!254;CL:0002076!9.71e-25!43;CL:0000223!5.77e-22!59;CL:0002251!3.34e-14!21;CL:0002368!1.96e-09!13;CL:0002159!1.96e-08!13;CL:0000082!1.98e-08!19 | |ontology_enrichment_celltype=CL:0000066!4.56e-37!254;CL:0002076!9.71e-25!43;CL:0000223!5.77e-22!59;CL:0002251!3.34e-14!21;CL:0002368!1.96e-09!13;CL:0002159!1.96e-08!13;CL:0000082!1.98e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.33e-16;42!CL:0002251;2.41e-14;20!CL:0002327;1.50e-13;4!CL:0002621;1.11e-10;3!CL:0002328;1.79e-10;3!CL:0002159;2.57e-08;14!CL:0000575;8.56e-08;2!CL:0000349;1.25e-07;19!CL:0002536;4.23e-07;2!CL:0000622;7.32e-07;5 | |ontology_enrichment_celltype_v019=CL:0002076;2.33e-16;42!CL:0002251;2.41e-14;20!CL:0002327;1.50e-13;4!CL:0002621;1.11e-10;3!CL:0002328;1.79e-10;3!CL:0002159;2.57e-08;14!CL:0000575;8.56e-08;2!CL:0000349;1.25e-07;19!CL:0002536;4.23e-07;2!CL:0000622;7.32e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.80e-22,253;CL:0002076,2.35e-20,42;CL:0000223,2.80e-15,58;CL:0002251,2.13e-14,20;CL:0002327,1.96e-13,4;CL:0002621,6.49e-11,3;CL:0002328,1.22e-10,3;CL:0002159,2.22e-08,14;CL:0000575,6.34e-08,2;CL:0000349,1.29e-07,19;CL:0002536,5.46e-07,2;CL:0000622,6.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.00e-08;58!UBERON:0008947;3.15e-07;29 | |ontology_enrichment_development_v019=CL:0000223;1.00e-08;58!UBERON:0008947;3.15e-07;29 | ||
|ontology_enrichment_disease=DOID:305!2.82e-36!106;DOID:0050687!3.13e-28!143;DOID:162!1.71e-15!235;DOID:14566!1.21e-14!239;DOID:1749!7.10e-13!14;DOID:299!1.06e-09!25 | |ontology_enrichment_disease=DOID:305!2.82e-36!106;DOID:0050687!3.13e-28!143;DOID:162!1.71e-15!235;DOID:14566!1.21e-14!239;DOID:1749!7.10e-13!14;DOID:299!1.06e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;9.99e-08;4!DOID:1612;9.99e-08;4 | |ontology_enrichment_disease_v019=DOID:5093;9.99e-08;4!DOID:1612;9.99e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.90e-09,106;DOID:5093,1.72e-07,4;DOID:1612,1.72e-07,4;DOID:0050687,8.03e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.37e-30!169;UBERON:0000925!6.37e-30!169;UBERON:0006595!6.37e-30!169;UBERON:0001004!2.23e-25!72;UBERON:0001007!3.81e-23!155;UBERON:0001555!3.81e-23!155;UBERON:0007026!3.81e-23!155;UBERON:0004921!3.44e-20!129;UBERON:0004185!3.44e-20!129;UBERON:0000077!1.24e-19!130;UBERON:0000065!1.91e-19!53;UBERON:0000072!7.06e-18!46;UBERON:0001041!4.75e-16!98;UBERON:0008947!1.52e-15!38;UBERON:0003258!1.52e-15!38;UBERON:0001737!4.28e-11!9;UBERON:0000166!6.48e-11!21;UBERON:0001557!1.62e-10!19;UBERON:0005153!2.07e-10!37;UBERON:0000161!3.32e-10!35;UBERON:0005157!6.18e-10!51;UBERON:0004807!1.01e-09!28;UBERON:0005911!1.19e-09!82;UBERON:0005631!3.02e-09!14;UBERON:0000158!3.02e-09!14;UBERON:0004802!1.98e-08!19;UBERON:0000115!1.98e-08!19;UBERON:0005178!2.40e-08!34;UBERON:0002224!2.40e-08!34;UBERON:0000063!4.01e-08!97;UBERON:0000165!5.83e-08!28;UBERON:0000930!5.83e-08!28;UBERON:0005181!6.00e-08!35;UBERON:0000064!2.36e-07!219;UBERON:0000344!2.67e-07!12;UBERON:0001044!4.62e-07!6;UBERON:0003293!4.62e-07!6;UBERON:0003294!4.62e-07!6;UBERON:0010047!4.62e-07!6;UBERON:0000167!4.62e-07!6;UBERON:0000915!4.70e-07!52;UBERON:0002048!8.96e-07!22;UBERON:0000117!8.96e-07!22;UBERON:0000171!8.96e-07!22;UBERON:0000170!8.96e-07!22;UBERON:0005597!8.96e-07!22;UBERON:0000118!8.96e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!6.37e-30!169;UBERON:0000925!6.37e-30!169;UBERON:0006595!6.37e-30!169;UBERON:0001004!2.23e-25!72;UBERON:0001007!3.81e-23!155;UBERON:0001555!3.81e-23!155;UBERON:0007026!3.81e-23!155;UBERON:0004921!3.44e-20!129;UBERON:0004185!3.44e-20!129;UBERON:0000077!1.24e-19!130;UBERON:0000065!1.91e-19!53;UBERON:0000072!7.06e-18!46;UBERON:0001041!4.75e-16!98;UBERON:0008947!1.52e-15!38;UBERON:0003258!1.52e-15!38;UBERON:0001737!4.28e-11!9;UBERON:0000166!6.48e-11!21;UBERON:0001557!1.62e-10!19;UBERON:0005153!2.07e-10!37;UBERON:0000161!3.32e-10!35;UBERON:0005157!6.18e-10!51;UBERON:0004807!1.01e-09!28;UBERON:0005911!1.19e-09!82;UBERON:0005631!3.02e-09!14;UBERON:0000158!3.02e-09!14;UBERON:0004802!1.98e-08!19;UBERON:0000115!1.98e-08!19;UBERON:0005178!2.40e-08!34;UBERON:0002224!2.40e-08!34;UBERON:0000063!4.01e-08!97;UBERON:0000165!5.83e-08!28;UBERON:0000930!5.83e-08!28;UBERON:0005181!6.00e-08!35;UBERON:0000064!2.36e-07!219;UBERON:0000344!2.67e-07!12;UBERON:0001044!4.62e-07!6;UBERON:0003293!4.62e-07!6;UBERON:0003294!4.62e-07!6;UBERON:0010047!4.62e-07!6;UBERON:0000167!4.62e-07!6;UBERON:0000915!4.70e-07!52;UBERON:0002048!8.96e-07!22;UBERON:0000117!8.96e-07!22;UBERON:0000171!8.96e-07!22;UBERON:0000170!8.96e-07!22;UBERON:0005597!8.96e-07!22;UBERON:0000118!8.96e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.61e-21;9!UBERON:0001557;6.61e-21;9!UBERON:0001911;1.50e-13;4!UBERON:0003929;2.12e-11;7!UBERON:0000485;2.94e-11;7!UBERON:0001949;1.11e-10;3!UBERON:0004815;1.79e-10;3!UBERON:0002031;1.79e-10;3!UBERON:0000072;1.94e-10;37!UBERON:0000065;2.47e-10;44!UBERON:0003350;6.21e-10;8!UBERON:0000161;9.85e-10;19!UBERON:0000166;9.85e-10;19!UBERON:0001004;1.07e-09;65!UBERON:0005631;6.48e-08;10!UBERON:0000158;6.48e-08;10!UBERON:0000165;9.29e-08;28!UBERON:0000305;1.06e-07;7!UBERON:0005911;6.58e-07;36!UBERON:0000344;7.22e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.61e-21;9!UBERON:0001557;6.61e-21;9!UBERON:0001911;1.50e-13;4!UBERON:0003929;2.12e-11;7!UBERON:0000485;2.94e-11;7!UBERON:0001949;1.11e-10;3!UBERON:0004815;1.79e-10;3!UBERON:0002031;1.79e-10;3!UBERON:0000072;1.94e-10;37!UBERON:0000065;2.47e-10;44!UBERON:0003350;6.21e-10;8!UBERON:0000161;9.85e-10;19!UBERON:0000166;9.85e-10;19!UBERON:0001004;1.07e-09;65!UBERON:0005631;6.48e-08;10!UBERON:0000158;6.48e-08;10!UBERON:0000165;9.29e-08;28!UBERON:0000305;1.06e-07;7!UBERON:0005911;6.58e-07;36!UBERON:0000344;7.22e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.91e-21,9;UBERON:0001004,4.42e-17,74;UBERON:0004119,1.43e-14,160;UBERON:0000925,1.43e-14,160;UBERON:0006595,1.43e-14,160;UBERON:0001911,1.96e-13,4;UBERON:0005333,1.96e-13,4;UBERON:0008425,1.96e-13,4;UBERON:0005311,1.96e-13,4;UBERON:0001007,4.12e-12,145;UBERON:0001555,4.12e-12,145;UBERON:0007026,4.12e-12,145;UBERON:0001557,9.80e-12,19;UBERON:0008947,3.09e-11,38;UBERON:0003258,3.09e-11,38;UBERON:0001949,6.49e-11,3;UBERON:0005631,1.04e-10,14;UBERON:0000158,1.04e-10,14;UBERON:0004815,1.22e-10,3;UBERON:0002031,1.22e-10,3;UBERON:0000166,2.12e-10,22;UBERON:0000072,4.68e-10,47;UBERON:0003350,5.19e-10,8;UBERON:0000065,8.41e-10,54;UBERON:0004921,2.27e-09,118;UBERON:0000485,1.01e-08,9;UBERON:0001041,1.15e-08,87;UBERON:0000161,1.50e-08,36;UBERON:0000305,1.20e-07,7;UBERON:0005157,1.67e-07,47;UBERON:0000165,1.73e-07,29;UBERON:0000930,1.73e-07,29;UBERON:0005153,6.69e-07,37;UBERON:0000344,7.20e-07,20 | |||
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| ||
|short_description=p5@PKP3 | |short_description=p5@PKP3 | ||
}} | }} |
Latest revision as of 22:45, 17 September 2015
Short description: | p5@PKP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PKP3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 20bp_to_ENST00000531857, ENST00000533069_5end |
EntrezGene: | PKP3 |
HGNC: | 9025 |
UniProt: | E9PK71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.80e-22 | 253 |
endo-epithelial cell | 2.35e-20 | 42 |
endodermal cell | 2.80e-15 | 58 |
epithelial cell of alimentary canal | 2.13e-14 | 20 |
mammary gland epithelial cell | 1.96e-13 | 4 |
gingival epithelial cell | 6.49e-11 | 3 |
bronchial epithelial cell | 1.22e-10 | 3 |
general ecto-epithelial cell | 2.22e-08 | 14 |
corneal epithelial cell | 6.34e-08 | 2 |
extraembryonic cell | 1.29e-07 | 19 |
amniotic epithelial cell | 5.46e-07 | 2 |
acinar cell | 6.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.91e-21 | 9 |
respiratory system | 4.42e-17 | 74 |
endoderm-derived structure | 1.43e-14 | 160 |
endoderm | 1.43e-14 | 160 |
presumptive endoderm | 1.43e-14 | 160 |
mammary gland | 1.96e-13 | 4 |
mammary bud | 1.96e-13 | 4 |
mammary ridge | 1.96e-13 | 4 |
mammary placode | 1.96e-13 | 4 |
digestive system | 4.12e-12 | 145 |
digestive tract | 4.12e-12 | 145 |
primitive gut | 4.12e-12 | 145 |
upper respiratory tract | 9.80e-12 | 19 |
respiratory primordium | 3.09e-11 | 38 |
endoderm of foregut | 3.09e-11 | 38 |
gingival epithelium | 6.49e-11 | 3 |
extraembryonic membrane | 1.04e-10 | 14 |
membranous layer | 1.04e-10 | 14 |
lower respiratory tract epithelium | 1.22e-10 | 3 |
epithelium of bronchus | 1.22e-10 | 3 |
oral opening | 2.12e-10 | 22 |
segment of respiratory tract | 4.68e-10 | 47 |
epithelium of mucosa | 5.19e-10 | 8 |
respiratory tract | 8.41e-10 | 54 |
subdivision of digestive tract | 2.27e-09 | 118 |
simple columnar epithelium | 1.01e-08 | 9 |
foregut | 1.15e-08 | 87 |
orifice | 1.50e-08 | 36 |
amnion | 1.20e-07 | 7 |
epithelial fold | 1.67e-07 | 47 |
mouth | 1.73e-07 | 29 |
stomodeum | 1.73e-07 | 29 |
epithelial bud | 6.69e-07 | 37 |
mucosa | 7.20e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.90e-09 | 106 |
thoracic cancer | 1.72e-07 | 4 |
breast cancer | 1.72e-07 | 4 |
cell type cancer | 8.03e-07 | 143 |