FFCP PHASE1:Hg19::chr9:841691..841702,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1761 | |EntrezGene=1761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2934 | |HGNC=2934 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5R6,F5GW87,Q6T1H9 | |UniProt=Q9Y5R6,F5GW87,Q6T1H9 | ||
|association_with_transcript=1bp_to_ENST00000382276,ENST00000451501,NM_021951,uc003zgu.1,uc003zgv.2_5end | |association_with_transcript=1bp_to_ENST00000382276,ENST00000451501,NM_021951,uc003zgu.1,uc003zgv.2_5end | ||
|cluster_id=chr9:841691..841702,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_DMRT1_5end | |description=CAGE_peak_1_at_DMRT1_5end | ||
|id=chr9:841691..841702,+ | |id=chr9:841691..841702,+ | ||
|ontology_enrichment_celltype=CL:0000333;3.60e-11;5 | |ontology_enrichment_celltype=CL:0000946!4.15e-11!1;CL:0000786!4.15e-11!1;CL:0000980!4.15e-11!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000333;3.60e-11;5 | ||
|ontology_enrichment_disease=DOID:3193;9.18e-26;2!DOID:962;9.18e-26;2!DOID:1192;1.12e-17;3!DOID:169;1.57e-09;6 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0000473;8.65e-26;8!UBERON:0003714;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0000013;3.60e-11;5!UBERON:0002410;3.60e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000010;8.85e-07;8 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease=DOID:3093!1.01e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3193;9.18e-26;2!DOID:962;9.18e-26;2!DOID:1192;1.12e-17;3!DOID:169;1.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,9.18e-26,2;DOID:962,9.18e-26,2;DOID:1192,1.12e-17,3;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.87e-11!8;UBERON:0007029!3.76e-11!1;UBERON:0003135!1.81e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003714;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0000013;3.60e-11;5!UBERON:0002410;3.60e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000010;8.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003714,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0000010,8.85e-07,8 | |||
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|short_description=p1@DMRT1 | |short_description=p1@DMRT1 | ||
}} | }} |
Latest revision as of 23:31, 17 September 2015
Short description: | p1@DMRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DMRT1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 1bp_to_ENST00000382276, ENST00000451501, NM_021951, uc003zgu.1, uc003zgv.2_5end |
EntrezGene: | DMRT1 |
HGNC: | 2934 |
UniProt: | Q9Y5R6F5GW87Q6T1H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
neural tissue | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 9.18e-26 | 2 |
neurofibroma | 9.18e-26 | 2 |
peripheral nervous system neoplasm | 1.12e-17 | 3 |
neuroendocrine tumor | 1.57e-09 | 6 |