FFCP PHASE1:Hg19::chr12:27106669..27106672,+: Difference between revisions
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|id=chr12:27106669..27106672,+
|short_description=p10@FGFR1OP2
|description=CAGE_peak_10_at_FGFR1OP2_5end
|association_with_transcript=-419bp_to_AY506561,CU689294_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26127 | |EntrezGene=26127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23098 | |HGNC=23098 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVK5 | |UniProt=Q9NVK5 | ||
|association_with_transcript=-419bp_to_AY506561,CU689294_5end | |||
|cluster_id=chr12:27106669..27106672,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_10_at_FGFR1OP2_5end | |||
|id=chr12:27106669..27106672,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.13e-72!42;CL:0000860!1.59e-67!45;CL:0002194!8.25e-60!63;CL:0000576!8.25e-60!63;CL:0000040!8.25e-60!63;CL:0000559!8.25e-60!63;CL:0002009!7.58e-58!65;CL:0000766!2.34e-57!76;CL:0000839!2.01e-53!70;CL:0000557!1.30e-52!71;CL:0000763!1.99e-37!112;CL:0000049!1.99e-37!112;CL:0002087!8.06e-35!119;CL:0000738!8.21e-34!140;CL:0002031!3.63e-28!124;CL:0000037!1.49e-26!172;CL:0000566!1.49e-26!172;CL:0000988!8.39e-25!182;CL:0002032!8.67e-24!165;CL:0000837!8.67e-24!165;CL:0002393!6.92e-11!9;CL:0002397!6.92e-11!9;CL:0000134!6.88e-10!358;CL:0002320!1.37e-09!365;CL:0000767!2.75e-09!3;CL:0000842!5.97e-09!3;CL:0000219!1.56e-08!390;CL:0000048!2.87e-07!430;CL:0000723!4.34e-07!436;CL:0000224!6.45e-07!4;CL:0000034!7.42e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.41e-29;39!CL:0000234;6.41e-29;39!CL:0000860;4.43e-26;33!CL:0002057;4.43e-26;33!CL:0000576;1.27e-17;48!CL:0000766;2.72e-14;69!CL:0000235;5.42e-13;6!CL:0000767;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.08e-37,48;CL:0000234,8.08e-37,48;CL:0002194,2.27e-29,59;CL:0000576,2.27e-29,59;CL:0000040,2.27e-29,59;CL:0000559,2.27e-29,59;CL:0000766,3.58e-29,72;CL:0002009,2.08e-28,61;CL:0000860,4.65e-27,42;CL:0002057,4.65e-27,42;CL:0000839,2.97e-26,66;CL:0000557,7.34e-26,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000738,2.78e-15,136;CL:0002087,6.25e-15,115;CL:0002031,2.75e-14,120;CL:0000235,6.90e-13,6;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000767,2.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-19;42!CL:0000049;1.06e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.27e-46!80;UBERON:0001474!1.12e-42!86;UBERON:0002390!1.97e-41!102;UBERON:0003061!1.97e-41!102;UBERON:0002193!2.66e-37!112;UBERON:0004765!1.16e-35!101;UBERON:0001434!1.16e-35!101;UBERON:0002405!9.55e-31!115;UBERON:0002204!1.20e-19!167;UBERON:0003081!7.18e-17!216;UBERON:0002384!3.51e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.83e-23,76;UBERON:0001474,4.27e-21,82;UBERON:0004765,3.41e-19,90;UBERON:0002405,1.46e-18,93;UBERON:0002390,1.35e-17,98;UBERON:0003061,1.35e-17,98;UBERON:0001434,3.08e-17,100;UBERON:0002193,6.28e-16,108;UBERON:0002204,4.23e-10,167;UBERON:0003081,3.49e-08,203 | |||
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|short_description=p10@FGFR1OP2 | |||
}} | }} |
Latest revision as of 23:58, 17 September 2015
Short description: | p10@FGFR1OP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FGFR1OP2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -419bp_to_AY506561, CU689294_5end |
EntrezGene: | FGFR1OP2 |
HGNC: | 23098 |
UniProt: | Q9NVK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.08e-37 | 48 |
phagocyte | 8.08e-37 | 48 |
monopoietic cell | 2.27e-29 | 59 |
monocyte | 2.27e-29 | 59 |
monoblast | 2.27e-29 | 59 |
promonocyte | 2.27e-29 | 59 |
myeloid leukocyte | 3.58e-29 | 72 |
macrophage dendritic cell progenitor | 2.08e-28 | 61 |
classical monocyte | 4.65e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.65e-27 | 42 |
myeloid lineage restricted progenitor cell | 2.97e-26 | 66 |
granulocyte monocyte progenitor cell | 7.34e-26 | 67 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 6.25e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.75e-14 | 120 |
macrophage | 6.90e-13 | 6 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
basophil | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.83e-23 | 76 |
bone element | 4.27e-21 | 82 |
skeletal element | 3.41e-19 | 90 |
immune system | 1.46e-18 | 93 |
hematopoietic system | 1.35e-17 | 98 |
blood island | 1.35e-17 | 98 |
skeletal system | 3.08e-17 | 100 |
hemolymphoid system | 6.28e-16 | 108 |
musculoskeletal system | 4.23e-10 | 167 |
lateral plate mesoderm | 3.49e-08 | 203 |