FFCP PHASE1:Hg19::chr6:31797703..31797718,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5233 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=309bp_to_AL360193_5end | |||
|cluster_id=chr6:31797703..31797718,+ | |||
|description=CAGE_peak_10_at_HSPA1B_5end | |||
|id=chr6:31797703..31797718,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.21e-07!42;CL:0000860!6.51e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-28;33!CL:0002057;2.38e-28;33!CL:0000473;7.79e-21;39!CL:0000234;7.79e-21;39!CL:0000576;1.60e-13;48!CL:0000766;5.10e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-23,42;CL:0002057,2.93e-23,42;CL:0000473,7.86e-20,48;CL:0000234,7.86e-20,48;CL:0000839,6.65e-17,66;CL:0000557,1.38e-16,67;CL:0000766,3.92e-15,72;CL:0002194,4.81e-15,59;CL:0000576,4.81e-15,59;CL:0000040,4.81e-15,59;CL:0000559,4.81e-15,59;CL:0002009,1.99e-14,61;CL:0000763,1.15e-08,108;CL:0000049,1.15e-08,108;CL:0002031,2.18e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.67e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;6.56e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.15e-14,76;UBERON:0001474,9.26e-13,82;UBERON:0004765,3.04e-11,90;UBERON:0002405,9.63e-11,93;UBERON:0002390,5.61e-10,98;UBERON:0003061,5.61e-10,98;UBERON:0001434,1.08e-09,100;UBERON:0002133,4.42e-09,2;UBERON:0002193,1.15e-08,108;UBERON:0003081,1.34e-07,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,2.18325655069035,0.232429036905685,1.6446715520873,2.78735733805593,1.7261543539329,1.2808035326455,2.36482229888585,2.06847408441971,4.51839278508678,2.70852973188684,0.188242339542605,0.272906150057846,1.12361742222542,0.306083892370903,0.962787081228281,4.47535988059329,0,0.398927315243264,1.27867425159808,0.870627715885752,0.56738522469114,0.622822248995575,2.51248665256743,3.65038042894141,1.52032191293582,0,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.337169380156203,0.964044119533928,0.330881918197182,0,1.18635309555548,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.352193736052904,2.69526550203004,0.576479813667846,4.54472760334968,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0,0,1.64648067356154,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0.473107245101804,0.468565659970853,0,4.5481500811197,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.680374821106063,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,1.33953315142039,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0,0,0,0.199579371432817,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0.281338832821026,0.111308705022906,0.329607748453519,0.63337622438398,1.39473591775749,0,0.251932747854276,0,0.123084805461069,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.455173793141999,0.762760950878299,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,1.77148277162768,0.482385754501632,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,0.153900517007594,0,0.23056390438806,0,0.108647371922008,0.638002319463839,0.274792780205587,0.533034776018635,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0.632994193584081,0.326465616318295,0.565412285735763,0,0,0.619202951523374,0,0.889563386041866,0,0,0.067401132980677,0,0.702793337176017,0,0.391329237864179,0,0.394584402849391,0,0.30607276163049,0,1.05226393590145,3.42171031610916,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0.0870592065804026,0.34945333648406,0.171986032471617,0,0.0730893170861856,0.410577285266046,0.484945082442097,0,0.225980740780532,0.137041924646751,0.993573058514948,0,0.391102765469606,0.160317640503067,0,0,0.432271251462318,0,0.343189995723929,0.14405479798815,0.372757606696298,0.942776138467182,0.271808412147228,0,0.305994652908965,0,2.40168115483916,0.547621515567972,0,0,0,1.95497680890578,0,2.15361907373044,0.399358000997982,0.429226048136571,0.89268582976749,0,0,0,0.393915911536118,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0.275078873194468,1.24632101408756,0.449947783103001,0.77380195455795,0,0,0.236417121897595,0.262272940674991,0,0.179287339332845,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0.566560457600628,0,2.65013777824443,0.387848869084652,0.92562821219883,0,0,0.533937062838473,0.314408610199332,0.828478110694391,0,0,0,0.638341257770182,2.1760712134779,1.0027595760908,0,1.63936315354902,0,1.77213635993397,0.122026264901963,0.3755727921195,1.72022758707021,0.665574309221114,0,0,0.124980407962107,0,0,0.470531639396343,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.453411851024545,0.463044948647668,0.244736704506468,0,0.308801447160972,0.219284049578707,0.353378291891762,0.578742114812744,0,0.256241518587947,0,1.51929978088691,0,0.194860308839388,0,0,0.327609848846413,1.47463745252232,0.211312123358627,0,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0.873677105536111,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0.478901577171454,1.64093091392604,0.504143392443436,0.0691572524642179,0.484426936895553,0,0,0,0.366857197043358,0.346576998451015,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0,0.135075169236789,2.34323429584154,0.620060389503552,0,0.546974809018219,0,0,2.11045493231545,0.255524855279191,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0.115233987555779,0.514464028312255,0.0679697329768317,0.0657727735628491,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0.691259661814092,0,0.354996002191696,0.255640214277473,1.69354820076372,0,0.62041277132864,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0.596852325484105,0.118920090777569,0,0.219881033490858,0.452888530700021,0,0.218559560503957,0,0.735444965261716,0.235676547101626,0.196308467114945,0.297046400327086,0,0,0,0.322289439867886,0.0999411559249289,0.357107877211315,0,0.240724100067505,0,0.458729283404541,1.00337708206016,0.631086248772738,0,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0.801652215796681,1.74600309116205,0,0.151557396436479,0.267964130156178,0.829169439458779,0.413731983447581,0.639701945702943,0.23806443146374,0,0.248298857183432,0.33639558774184,0.636471582781649,0.808468755832877,0,0.342233301085281,0.134704106029175,0.502055437748735,0.665320713092027,0,0.106727345877715,0,0,0,0.366724332548599,0.406896178315738,2.66302709674205,0.201273793591026,0 | |||
|short_description=p10@HSPA1B | |||
}} |
Latest revision as of 00:29, 18 September 2015
Short description: | p10@HSPA1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HSPA1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 309bp_to_AL360193_5end |
EntrezGene: | HSPA1B |
HGNC: | 5233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.93e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-23 | 42 |
defensive cell | 7.86e-20 | 48 |
phagocyte | 7.86e-20 | 48 |
myeloid lineage restricted progenitor cell | 6.65e-17 | 66 |
granulocyte monocyte progenitor cell | 1.38e-16 | 67 |
myeloid leukocyte | 3.92e-15 | 72 |
monopoietic cell | 4.81e-15 | 59 |
monocyte | 4.81e-15 | 59 |
monoblast | 4.81e-15 | 59 |
promonocyte | 4.81e-15 | 59 |
macrophage dendritic cell progenitor | 1.99e-14 | 61 |
myeloid cell | 1.15e-08 | 108 |
common myeloid progenitor | 1.15e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.18e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.15e-14 | 76 |
bone element | 9.26e-13 | 82 |
skeletal element | 3.04e-11 | 90 |
immune system | 9.63e-11 | 93 |
hematopoietic system | 5.61e-10 | 98 |
blood island | 5.61e-10 | 98 |
skeletal system | 1.08e-09 | 100 |
atrioventricular valve | 4.42e-09 | 2 |
hemolymphoid system | 1.15e-08 | 108 |
lateral plate mesoderm | 1.34e-07 | 203 |