FFCP PHASE1:Hg19::chr4:56262082..56262111,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:56262082..56262111,+
|short_description=p2@TMEM165
|description=CAGE_peak_2_at_TMEM165_5end
|association_with_transcript=0bp_to_NM_018475,uc003hax.2,uc011b...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55858 | |EntrezGene=55858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30760 | |HGNC=30760 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC07 | |UniProt=Q9HC07 | ||
|association_with_transcript=0bp_to_NM_018475,uc003hax.2,uc011bzy.1_5end | |||
|cluster_id=chr4:56262082..56262111,+ | |||
|description=CAGE_peak_2_at_TMEM165_5end | |||
|id=chr4:56262082..56262111,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.87e-26!591;CL:0000055!3.40e-20!180;CL:0000144!3.76e-20!625;CL:0000048!1.07e-16!430;CL:0000222!1.11e-15!119;CL:0000723!1.29e-15!436;CL:0000034!4.45e-14!444;CL:0000057!7.55e-12!75;CL:0000183!1.52e-11!59;CL:0000192!7.47e-11!42;CL:0000514!7.47e-11!42;CL:0002078!9.81e-11!44;CL:0000680!1.42e-10!57;CL:0000056!1.42e-10!57;CL:0000355!1.42e-10!57;CL:0000187!6.93e-10!54;CL:0000115!8.25e-10!35;CL:0000548!2.86e-09!679;CL:0000004!2.86e-09!679;CL:0000255!2.86e-09!679;CL:0000012!5.18e-09!682;CL:0000359!6.13e-09!32;CL:0002320!8.60e-09!365;CL:0000003!1.73e-08!722;CL:0000393!5.83e-08!60;CL:0000211!5.83e-08!60;CL:0000134!2.22e-07!358;CL:0000327!2.41e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.03e-08;36!CL:0000359;2.53e-08;32!CL:0002078;6.31e-08;45!CL:0000327;9.53e-08;15!CL:0000192;1.27e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.17e-17,427;CL:0000723,4.02e-16,433;CL:0000222,5.31e-16,121;CL:0000034,1.49e-14,441;CL:0000057,3.49e-12,76;CL:0002078,4.17e-11,45;CL:0000192,9.63e-11,43;CL:0000514,9.63e-11,43;CL:0000680,1.65e-10,58;CL:0000056,1.65e-10,58;CL:0000355,1.65e-10,58;CL:0000115,3.47e-10,36;CL:0000187,8.00e-10,55;CL:0002320,3.77e-09,361;CL:0000359,6.13e-09,32;CL:0000393,6.26e-08,61;CL:0000211,6.26e-08,61;CL:0000327,1.02e-07,15;CL:0000134,1.05e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;1.27e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.18e-18!216;UBERON:0004535!1.22e-17!110;UBERON:0001009!1.96e-17!113;UBERON:0002049!7.81e-17!79;UBERON:0007798!7.81e-17!79;UBERON:0000055!1.46e-14!69;UBERON:0002204!1.13e-13!167;UBERON:0004872!2.79e-12!84;UBERON:0001981!1.55e-11!60;UBERON:0007500!1.55e-11!60;UBERON:0004537!1.55e-11!60;UBERON:0006965!1.55e-11!60;UBERON:0000914!1.78e-10!83;UBERON:0002329!1.78e-10!83;UBERON:0003077!1.78e-10!83;UBERON:0003059!1.78e-10!83;UBERON:0007282!1.78e-10!83;UBERON:0009618!1.78e-10!83;UBERON:0007285!1.78e-10!83;UBERON:0003914!1.34e-09!118;UBERON:0000486!2.12e-09!82;UBERON:0004290!2.36e-09!70;UBERON:0002384!4.59e-09!375;UBERON:0001637!1.00e-08!42;UBERON:0003509!1.00e-08!42;UBERON:0004572!1.00e-08!42;UBERON:0001134!1.23e-08!61;UBERON:0002036!1.23e-08!61;UBERON:0003082!1.23e-08!61;UBERON:0000926!3.41e-08!448;UBERON:0004120!3.41e-08!448;UBERON:0006603!3.41e-08!448;UBERON:0002385!9.26e-08!63;UBERON:0001015!9.26e-08!63;UBERON:0000383!9.26e-08!63;UBERON:0004573!1.23e-07!33;UBERON:0004571!1.23e-07!33;UBERON:0005256!3.83e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;2.66e-08;65!UBERON:0002049;1.71e-07;75!UBERON:0007798;1.71e-07;75!UBERON:0004573;2.88e-07;33!UBERON:0004571;2.88e-07;33!UBERON:0007500;5.06e-07;56!UBERON:0001981;5.06e-07;56!UBERON:0004537;5.06e-07;56!UBERON:0003914;5.65e-07;74!UBERON:0002405;7.32e-07;27!UBERON:0001637;9.71e-07;42!UBERON:0003509;9.71e-07;42!UBERON:0004572;9.71e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.76e-17,109;UBERON:0003081,4.00e-17,203;UBERON:0000926,4.21e-17,315;UBERON:0004120,4.21e-17,315;UBERON:0006603,4.21e-17,315;UBERON:0001009,4.42e-17,112;UBERON:0002049,1.83e-16,78;UBERON:0007798,1.83e-16,78;UBERON:0002204,1.62e-15,167;UBERON:0000055,3.36e-14,68;UBERON:0004872,5.97e-12,83;UBERON:0007500,3.43e-11,59;UBERON:0001981,3.43e-11,59;UBERON:0004537,3.43e-11,59;UBERON:0006965,3.43e-11,59;UBERON:0007503,3.83e-11,78;UBERON:0003914,1.33e-09,117;UBERON:0002384,2.00e-09,371;UBERON:0000486,2.23e-09,83;UBERON:0002329,2.54e-09,71;UBERON:0003059,2.54e-09,71;UBERON:0007282,2.54e-09,71;UBERON:0004290,2.54e-09,71;UBERON:0009618,2.54e-09,71;UBERON:0007524,3.55e-09,73;UBERON:0003077,6.13e-09,72;UBERON:0007285,6.13e-09,72;UBERON:0001637,1.00e-08,42;UBERON:0003509,1.00e-08,42;UBERON:0004572,1.00e-08,42;UBERON:0001134,1.34e-08,62;UBERON:0002036,1.34e-08,62;UBERON:0003082,1.34e-08,62;UBERON:0002385,9.82e-08,64;UBERON:0001015,9.82e-08,64;UBERON:0000383,9.82e-08,64;UBERON:0004573,1.23e-07,33;UBERON:0004571,1.23e-07,33;UBERON:0001434,1.73e-07,100;UBERON:0002193,8.32e-07,108;UBERON:0002405,8.42e-07,93 | |||
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| ||
|short_description=p2@TMEM165 | |||
}} | }} |
Latest revision as of 01:45, 18 September 2015
Short description: | p2@TMEM165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM165_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_018475, uc003hax.2, uc011bzy.1_5end |
EntrezGene: | TMEM165 |
HGNC: | 30760 |
UniProt: | Q9HC07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.17e-17 | 427 |
somatic stem cell | 4.02e-16 | 433 |
mesodermal cell | 5.31e-16 | 121 |
stem cell | 1.49e-14 | 441 |
fibroblast | 3.49e-12 | 76 |
meso-epithelial cell | 4.17e-11 | 45 |
smooth muscle cell | 9.63e-11 | 43 |
smooth muscle myoblast | 9.63e-11 | 43 |
muscle precursor cell | 1.65e-10 | 58 |
myoblast | 1.65e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-10 | 58 |
endothelial cell | 3.47e-10 | 36 |
muscle cell | 8.00e-10 | 55 |
connective tissue cell | 3.77e-09 | 361 |
vascular associated smooth muscle cell | 6.13e-09 | 32 |
electrically responsive cell | 6.26e-08 | 61 |
electrically active cell | 6.26e-08 | 61 |
extracellular matrix secreting cell | 1.02e-07 | 15 |
mesenchymal cell | 1.05e-07 | 354 |