FFCP PHASE1:Hg19::chr17:7750919..7750930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_uc002gix.2_5end | |association_with_transcript=55bp_to_uc002gix.2_5end | ||
|cluster_id=chr17:7750919..7750930,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_14_at_KDM6B_5end | |description=CAGE_peak_14_at_KDM6B_5end | ||
|id=chr17:7750919..7750930,+ | |id=chr17:7750919..7750930,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.86e-30!42;CL:0000860!4.99e-27!45;CL:0000766!9.52e-23!76;CL:0000738!3.06e-18!140;CL:0000557!3.62e-18!71;CL:0000839!2.76e-17!70;CL:0002009!4.92e-16!65;CL:0002194!1.40e-15!63;CL:0000576!1.40e-15!63;CL:0000040!1.40e-15!63;CL:0000559!1.40e-15!63;CL:0002031!7.52e-15!124;CL:0000763!1.51e-13!112;CL:0000049!1.51e-13!112;CL:0002087!1.72e-13!119;CL:0000037!6.36e-13!172;CL:0000566!6.36e-13!172;CL:0002032!8.15e-13!165;CL:0000837!8.15e-13!165;CL:0000988!1.74e-12!182 | |ontology_enrichment_celltype=CL:0002057!7.86e-30!42;CL:0000860!4.99e-27!45;CL:0000766!9.52e-23!76;CL:0000738!3.06e-18!140;CL:0000557!3.62e-18!71;CL:0000839!2.76e-17!70;CL:0002009!4.92e-16!65;CL:0002194!1.40e-15!63;CL:0000576!1.40e-15!63;CL:0000040!1.40e-15!63;CL:0000559!1.40e-15!63;CL:0002031!7.52e-15!124;CL:0000763!1.51e-13!112;CL:0000049!1.51e-13!112;CL:0002087!1.72e-13!119;CL:0000037!6.36e-13!172;CL:0000566!6.36e-13!172;CL:0002032!8.15e-13!165;CL:0000837!8.15e-13!165;CL:0000988!1.74e-12!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.31e-76;33!CL:0002057;7.31e-76;33!CL:0000473;1.78e-50;39!CL:0000234;1.78e-50;39!CL:0000576;2.27e-36;48!CL:0000766;1.27e-27;69!CL:0000771;4.17e-14;2!CL:0000094;2.90e-13;8!CL:0000763;2.97e-12;100!CL:0000081;1.10e-09;11!CL:0000775;1.26e-09;3!CL:0002087;1.63e-09;104!CL:0000738;5.22e-08;136!CL:0002581;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.72e-64,42;CL:0002057,3.72e-64,42;CL:0000473,1.26e-55,48;CL:0000234,1.26e-55,48;CL:0000766,1.26e-55,72;CL:0002194,1.11e-43,59;CL:0000576,1.11e-43,59;CL:0000040,1.11e-43,59;CL:0000559,1.11e-43,59;CL:0000839,7.59e-43,66;CL:0000557,3.74e-42,67;CL:0002009,3.86e-42,61;CL:0000763,1.08e-35,108;CL:0000049,1.08e-35,108;CL:0000738,2.05e-27,136;CL:0002032,1.95e-22,161;CL:0000837,1.95e-22,161;CL:0002031,8.57e-22,120;CL:0000037,2.64e-21,168;CL:0002087,1.40e-20,115;CL:0000988,5.57e-20,177;CL:0000771,4.18e-14,2;CL:0000094,3.10e-13,8;CL:0000081,1.15e-09,11;CL:0000775,1.38e-09,3;CL:0000134,2.46e-09,354;CL:0002320,4.72e-09,361;CL:0000219,4.69e-08,386;CL:0002581,9.10e-08,1;CL:0000034,3.13e-07,441;CL:0000048,7.81e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-48;42!CL:0000049;1.98e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.66e-17!102;UBERON:0003061!2.66e-17!102;UBERON:0002371!6.61e-16!80;UBERON:0002193!3.59e-15!112;UBERON:0001474!5.96e-14!86;UBERON:0002405!2.08e-13!115;UBERON:0004765!1.83e-12!101;UBERON:0001434!1.83e-12!101 | |ontology_enrichment_uberon=UBERON:0002390!2.66e-17!102;UBERON:0003061!2.66e-17!102;UBERON:0002371!6.61e-16!80;UBERON:0002193!3.59e-15!112;UBERON:0001474!5.96e-14!86;UBERON:0002405!2.08e-13!115;UBERON:0004765!1.83e-12!101;UBERON:0001434!1.83e-12!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.00e-36,76;UBERON:0001474,9.29e-34,82;UBERON:0004765,2.07e-30,90;UBERON:0002405,2.65e-29,93;UBERON:0002390,1.33e-27,98;UBERON:0003061,1.33e-27,98;UBERON:0001434,5.69e-27,100;UBERON:0002193,1.13e-24,108;UBERON:0002204,1.80e-14,167;UBERON:0003081,2.15e-12,203;UBERON:0002384,1.15e-08,371 | |||
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| ||
|short_description=p14@KDM6B | |short_description=p14@KDM6B | ||
}} | }} |
Latest revision as of 01:49, 18 September 2015
Short description: | p14@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 55bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.72e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.72e-64 | 42 |
defensive cell | 1.26e-55 | 48 |
phagocyte | 1.26e-55 | 48 |
myeloid leukocyte | 1.26e-55 | 72 |
monopoietic cell | 1.11e-43 | 59 |
monocyte | 1.11e-43 | 59 |
monoblast | 1.11e-43 | 59 |
promonocyte | 1.11e-43 | 59 |
myeloid lineage restricted progenitor cell | 7.59e-43 | 66 |
granulocyte monocyte progenitor cell | 3.74e-42 | 67 |
macrophage dendritic cell progenitor | 3.86e-42 | 61 |
myeloid cell | 1.08e-35 | 108 |
common myeloid progenitor | 1.08e-35 | 108 |
leukocyte | 2.05e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.95e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 8.57e-22 | 120 |
hematopoietic stem cell | 2.64e-21 | 168 |
nongranular leukocyte | 1.40e-20 | 115 |
hematopoietic cell | 5.57e-20 | 177 |
eosinophil | 4.18e-14 | 2 |
granulocyte | 3.10e-13 | 8 |
blood cell | 1.15e-09 | 11 |
neutrophil | 1.38e-09 | 3 |
mesenchymal cell | 2.46e-09 | 354 |
connective tissue cell | 4.72e-09 | 361 |
motile cell | 4.69e-08 | 386 |
perirenal preadipocyte | 9.10e-08 | 1 |
stem cell | 3.13e-07 | 441 |
multi fate stem cell | 7.81e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.00e-36 | 76 |
bone element | 9.29e-34 | 82 |
skeletal element | 2.07e-30 | 90 |
immune system | 2.65e-29 | 93 |
hematopoietic system | 1.33e-27 | 98 |
blood island | 1.33e-27 | 98 |
skeletal system | 5.69e-27 | 100 |
hemolymphoid system | 1.13e-24 | 108 |
musculoskeletal system | 1.80e-14 | 167 |
lateral plate mesoderm | 2.15e-12 | 203 |
connective tissue | 1.15e-08 | 371 |