FFCP PHASE1:Hg19::chr15:52311464..52311484,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:52311464..52311484,+ to FFCP PHASE1:Hg19::chr15:52311464..52311484,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5597 | |EntrezGene=5597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6879 | |HGNC=6879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000558100_5end | |||
|cluster_id=chr15:52311464..52311484,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_MAPK6_5end | |||
|id=chr15:52311464..52311484,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.15e-26!42;CL:0000766!2.91e-25!76;CL:0000557!1.54e-24!71;CL:0000860!6.61e-24!45;CL:0000839!7.99e-22!70;CL:0002009!3.69e-21!65;CL:0002194!5.44e-20!63;CL:0000576!5.44e-20!63;CL:0000040!5.44e-20!63;CL:0000559!5.44e-20!63;CL:0000763!2.99e-19!112;CL:0000049!2.99e-19!112;CL:0000738!1.95e-18!140;CL:0002031!1.29e-16!124;CL:0000037!2.86e-16!172;CL:0000566!2.86e-16!172;CL:0002032!1.50e-15!165;CL:0000837!1.50e-15!165;CL:0002087!1.36e-14!119;CL:0000988!1.65e-14!182;CL:0000063!5.28e-14!578;CL:0000012!8.48e-12!682;CL:0000134!1.35e-11!358;CL:0000548!4.39e-11!679;CL:0000004!4.39e-11!679;CL:0000255!4.39e-11!679;CL:0002320!2.00e-10!365;CL:0000144!2.62e-09!625;CL:0000219!4.61e-09!390;CL:0000034!4.92e-09!444;CL:0000723!1.42e-08!436;CL:0002371!6.02e-08!591;CL:0000048!6.22e-08!430;CL:0000003!4.42e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-30;33!CL:0002057;2.47e-30;33!CL:0000576;4.10e-23;48!CL:0000473;1.19e-22;39!CL:0000234;1.19e-22;39!CL:0000766;6.02e-19;69!CL:0002087;3.27e-10;104!CL:0000763;2.65e-08;100!CL:0000738;7.42e-08;136!CL:0002393;5.95e-07;6!CL:0002397;5.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.55e-40,72;CL:0000860,7.28e-40,42;CL:0002057,7.28e-40,42;CL:0000557,3.89e-39,67;CL:0000473,2.91e-36,48;CL:0000234,2.91e-36,48;CL:0000738,1.37e-34,136;CL:0000839,1.54e-34,66;CL:0002009,1.05e-33,61;CL:0002194,8.10e-32,59;CL:0000576,8.10e-32,59;CL:0000040,8.10e-32,59;CL:0000559,8.10e-32,59;CL:0002031,2.29e-31,120;CL:0002087,2.02e-28,115;CL:0000037,5.32e-26,168;CL:0000763,9.37e-26,108;CL:0000049,9.37e-26,108;CL:0002032,1.20e-25,161;CL:0000837,1.20e-25,161;CL:0000988,1.32e-24,177;CL:0000134,2.62e-15,354;CL:0002320,3.00e-14,361;CL:0000034,2.27e-12,441;CL:0000723,2.40e-12,433;CL:0000048,3.29e-11,427;CL:0000219,1.18e-10,386;CL:0002393,4.42e-08,9;CL:0002397,4.42e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.73e-29;42!CL:0000049;1.42e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.17e-22!80;UBERON:0001474!1.23e-21!86;UBERON:0004765!2.94e-18!101;UBERON:0001434!2.94e-18!101;UBERON:0002390!3.02e-16!102;UBERON:0003061!3.02e-16!102;UBERON:0002405!1.06e-15!115;UBERON:0002193!2.49e-13!112;UBERON:0002384!3.51e-10!375;UBERON:0002204!2.51e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-35,76;UBERON:0001474,3.24e-32,82;UBERON:0004765,6.59e-31,90;UBERON:0002390,3.50e-28,98;UBERON:0003061,3.50e-28,98;UBERON:0002405,6.98e-27,93;UBERON:0001434,2.14e-25,100;UBERON:0002193,4.48e-24,108;UBERON:0002384,7.85e-13,371;UBERON:0002204,2.29e-11,167;UBERON:0003081,7.62e-09,203 | |||
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| ||
|short_description=p4@MAPK6 | |||
}} | }} |
Latest revision as of 02:04, 18 September 2015
Short description: | p4@MAPK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAPK6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 29bp_to_ENST00000558100_5end |
EntrezGene: | MAPK6 |
HGNC: | 6879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.55e-40 | 72 |
classical monocyte | 7.28e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.28e-40 | 42 |
granulocyte monocyte progenitor cell | 3.89e-39 | 67 |
defensive cell | 2.91e-36 | 48 |
phagocyte | 2.91e-36 | 48 |
leukocyte | 1.37e-34 | 136 |
myeloid lineage restricted progenitor cell | 1.54e-34 | 66 |
macrophage dendritic cell progenitor | 1.05e-33 | 61 |
monopoietic cell | 8.10e-32 | 59 |
monocyte | 8.10e-32 | 59 |
monoblast | 8.10e-32 | 59 |
promonocyte | 8.10e-32 | 59 |
hematopoietic lineage restricted progenitor cell | 2.29e-31 | 120 |
nongranular leukocyte | 2.02e-28 | 115 |
hematopoietic stem cell | 5.32e-26 | 168 |
myeloid cell | 9.37e-26 | 108 |
common myeloid progenitor | 9.37e-26 | 108 |
hematopoietic oligopotent progenitor cell | 1.20e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-25 | 161 |
hematopoietic cell | 1.32e-24 | 177 |
mesenchymal cell | 2.62e-15 | 354 |
connective tissue cell | 3.00e-14 | 361 |
stem cell | 2.27e-12 | 441 |
somatic stem cell | 2.40e-12 | 433 |
multi fate stem cell | 3.29e-11 | 427 |
motile cell | 1.18e-10 | 386 |
intermediate monocyte | 4.42e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.42e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-35 | 76 |
bone element | 3.24e-32 | 82 |
skeletal element | 6.59e-31 | 90 |
hematopoietic system | 3.50e-28 | 98 |
blood island | 3.50e-28 | 98 |
immune system | 6.98e-27 | 93 |
skeletal system | 2.14e-25 | 100 |
hemolymphoid system | 4.48e-24 | 108 |
connective tissue | 7.85e-13 | 371 |
musculoskeletal system | 2.29e-11 | 167 |
lateral plate mesoderm | 7.62e-09 | 203 |