FFCP PHASE1:Hg19::chr11:46332679..46332695,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:46332679..46332695,+ to FFCP PHASE1:Hg19::chr11:46332679..46332695,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90993 | |EntrezGene=90993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18856 | |HGNC=18856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000530518_5end | |||
|cluster_id=chr11:46332679..46332695,+ | |||
|description=CAGE_peak_12_at_CREB3L1_5end | |||
|id=chr11:46332679..46332695,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.96e-30!180;CL:0000057!4.16e-20!75;CL:0000048!7.92e-12!430;CL:0000680!1.42e-11!57;CL:0000056!1.42e-11!57;CL:0000355!1.42e-11!57;CL:0000187!1.69e-11!54;CL:0000723!4.61e-11!436;CL:0000183!6.98e-11!59;CL:0000192!1.90e-10!42;CL:0000514!1.90e-10!42;CL:0000034!2.01e-10!444;CL:0000393!2.40e-10!60;CL:0000211!2.40e-10!60;CL:0000144!1.56e-09!625;CL:0002371!3.61e-08!591;CL:0002620!1.15e-07!23;CL:0000359!2.61e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.87e-10;3!CL:0002570;7.58e-10;8!CL:0002363;3.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.69e-10,3;CL:0002570,4.44e-10,8;CL:0000048,5.17e-09,427;CL:0000723,1.01e-08,433;CL:0000034,2.38e-08,441;CL:0000057,8.40e-08,76;CL:0002363,5.95e-07,2;CL:0000008,5.95e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;3.46e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.61e-11;3!DOID:127;7.61e-11;3!DOID:0060072;3.17e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.60e-11,3;DOID:127,3.60e-11,3;DOID:0060072,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.56e-13!83;UBERON:0002329!5.56e-13!83;UBERON:0003077!5.56e-13!83;UBERON:0003059!5.56e-13!83;UBERON:0007282!5.56e-13!83;UBERON:0009618!5.56e-13!83;UBERON:0007285!5.56e-13!83;UBERON:0004290!2.09e-11!70;UBERON:0002385!1.52e-10!63;UBERON:0001015!1.52e-10!63;UBERON:0000383!1.52e-10!63;UBERON:0001134!5.07e-10!61;UBERON:0002036!5.07e-10!61;UBERON:0003082!5.07e-10!61;UBERON:0000486!2.77e-09!82;UBERON:0005256!4.88e-09!143;UBERON:0003102!5.43e-09!95;UBERON:0002199!6.00e-07!45;UBERON:0002416!6.00e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.04e-08;14!UBERON:0003566;3.46e-07;2!UBERON:0001777;3.46e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.11e-08,14;UBERON:0003566,5.95e-07,2;UBERON:0001777,5.95e-07,2 | |||
|phase1_expression=0,0.642301571672949,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0.618831764800233,0,1.34465029290355,3.01347264011988,0,0,0,0.408001382488506,0.626909442956176,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.869079113764942,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0.709336764396714,0,2.1349799145941,2.4666754841716,0,0.538842688278752,0,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0.61417158655884,1.13658359293342,0,0.494533858557114,0.910161361938026,1.43723628363248,0.168336113954066,0.250237039743928,0,1.31693286264251,1.22595118319608,0.901428353439581,0.567160915800105,1.4351170855109,0.640672166455702,1.05965950579781,0.600182192168805,0.721367704669072,0,0.930584281657949,0,0.876933046450788,0.504867548488229,0.552299391853796,0.969876340912871,1.06502877754984,0.806016785821122,0.508681776931463,0,0,0,0,0,0.232387885739037,0,0,0,1.56449532329816,4.5026865673502,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,1.3032332212413,1.03993478527958,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,3.381211010224,0.26593811658487,0,0.771622122786426,1.41849132023278,0,0.285955987316295,3.25572963234866,0,0.325736184293735,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.813795071099207,0.831883446123229,2.49800584316026,1.10391690523754,1.05427273493442,0,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0,0,0.907170879989041,0.248107807818777,0.153461973288062,1.12264037773229,0.384417447767103,1.02341449813341,1.93024705372329,0,0.616838775210622,0.355123450626254,0.164254312027618,1.03850885836724,0.929683027679674,0.362578348774867,0.200506470303285,0,1.14814448164607,3.45973219212762,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,1.00726411300178,0.41254749960294,0,0.650060246036521,1.6068392984416,0.48335359146061,0,0.460511024178389,0.413509717453592,0.214840489736547,0.290033387828457,0.170453254832202,0.445160178233687,0,0,0,0,3.253918845081,1.88887408098384,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0,0,0,0.38126038784765,1.02359116524534,0.855877976067841,0.318203247925937,1.56989728039846,0.719489830333259,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,0.974853958525138,2.11300293513511,0.682499557039929,3.11091950298168,0,0.551365343546124,1.32687795048244,0.876901770507525,1.15755106853338,0,0.202910376962704,0.92947049429925,0.563391205064483,0.430234056612155,0.687743287091848,0,0.354761064070598,0.844430541190656,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.641183153813036,0.533034776018635,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.480952921509202,0.213452994739353,0,0.72045208577053,0,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25799761052228,1.72844298240254,2.61269888087527,0,0,0.681552087141687,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.597019211547496,1.40227985908335,1.10961172300523,0.947015026375446,0.251567901752575,0,0.228840068396924,1.20984739010591,0.310874401165561,0.295710299979268,0.477890301491107,0,0.310525913752519,1.65882483136342,0.797525143673985,0.521745061811734,0.601030435988874,0.380805212168795,0,0.727394636810238,0.214821114084977,1.39210127963548,2.3885753321917,0.800055529326307,1.71697852591396,1.6837474438296,0,0.385239660814607,0,0.260994291965212,0.906823702049089,0.926089897295336,0.244736704506468,0.179088841081487,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363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| ||
|short_description=p12@CREB3L1 | |||
}} | }} |
Latest revision as of 02:17, 18 September 2015
Short description: | p12@CREB3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CREB3L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000530518_5end |
EntrezGene: | CREB3L1 |
HGNC: | 18856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.69e-10 | 3 |
mesenchymal stem cell of adipose | 4.44e-10 | 8 |
multi fate stem cell | 5.17e-09 | 427 |
somatic stem cell | 1.01e-08 | 433 |
stem cell | 2.38e-08 | 441 |
fibroblast | 8.40e-08 | 76 |
keratocyte | 5.95e-07 | 2 |
migratory cranial neural crest cell | 5.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 6.11e-08 | 14 |
head connective tissue | 5.95e-07 | 2 |
substantia propria of cornea | 5.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.60e-11 | 3 |
leiomyoma | 3.60e-11 | 3 |
benign neoplasm | 1.82e-08 | 4 |