FFCP PHASE1:Hg19::chr4:57522753..57522760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000503639_5end | |association_with_transcript=-46bp_to_ENST00000503639_5end | ||
|cluster_id=chr4:57522753..57522760,- | |||
|coexpression_cluster_id=C431 | |||
|description=CAGE_peak_18_at_HOPX_5end | |description=CAGE_peak_18_at_HOPX_5end | ||
|id=chr4:57522753..57522760,- | |id=chr4:57522753..57522760,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;7.14e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,9.18e-26,2;CL:0000008,9.18e-26,2 | |||
|ontology_enrichment_development_v019=CL:0000008;7.14e-26;2!UBERON:0007297;7.14e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!8.13e-22!32;UBERON:0000956!1.17e-21!25;UBERON:0000203!1.17e-21!25;UBERON:0002619!3.92e-21!22;UBERON:0007023!7.00e-21!115;UBERON:0002020!1.98e-20!34;UBERON:0003528!1.98e-20!34;UBERON:0001893!2.33e-20!34;UBERON:0001950!1.34e-19!20;UBERON:0002780!7.08e-19!41;UBERON:0001890!7.08e-19!41;UBERON:0006240!7.08e-19!41;UBERON:0002791!2.20e-18!33;UBERON:0003080!2.40e-18!42;UBERON:0001049!4.33e-18!57;UBERON:0005068!4.33e-18!57;UBERON:0006241!4.33e-18!57;UBERON:0007135!4.33e-18!57;UBERON:0000955!1.57e-17!69;UBERON:0006238!1.57e-17!69;UBERON:0002616!2.49e-17!59;UBERON:0001017!2.58e-17!82;UBERON:0005743!2.88e-16!86;UBERON:0003056!5.23e-15!61;UBERON:0000200!7.01e-15!6;UBERON:0003075!7.42e-15!86;UBERON:0007284!7.42e-15!86;UBERON:0000073!3.12e-14!94;UBERON:0001016!3.12e-14!94;UBERON:0002346!5.75e-14!90;UBERON:0000033!4.89e-12!123;UBERON:0002771!7.82e-12!3;UBERON:0000153!3.26e-11!129;UBERON:0007811!3.26e-11!129;UBERON:0004121!6.71e-09!169;UBERON:0000924!1.48e-08!173;UBERON:0006601!1.48e-08!173;UBERON:0002021!1.02e-07!5;UBERON:0001871!1.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.99e-50;1!UBERON:0003566;7.14e-26;2!UBERON:0001777;7.14e-26;2!UBERON:0006947;9.45e-18;3!UBERON:0004054;9.45e-18;3!UBERON:0005904;1.13e-13;4!UBERON:0003891;1.13e-13;4!UBERON:0000964;1.13e-13;4!UBERON:0010409;1.13e-13;4!UBERON:0002021;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.99e-50,1;UBERON:0003566,9.18e-26,2;UBERON:0001777,9.18e-26,2;UBERON:0006947,9.46e-18,3;UBERON:0004054,9.46e-18,3;UBERON:0005904,1.13e-13,4;UBERON:0003891,1.29e-13,4;UBERON:0000964,1.29e-13,4;UBERON:0010409,1.29e-13,4;UBERON:0004348,1.29e-13,4;UBERON:0005427,1.29e-13,4;UBERON:0002021,2.94e-11,5;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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| ||
|short_description=p18@HOPX | |short_description=p18@HOPX | ||
}} | }} |
Latest revision as of 02:57, 18 September 2015
Short description: | p18@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_HOPX_5end |
Coexpression cluster: | C431_acute_leukemia_Mast_leiomyoblastoma_chronic_immature_CD34 |
Association with transcript: | -46bp_to_ENST00000503639_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 9.18e-26 | 2 |
migratory cranial neural crest cell | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.99e-50 | 1 |
head connective tissue | 9.18e-26 | 2 |
substantia propria of cornea | 9.18e-26 | 2 |
male genital duct | 9.46e-18 | 3 |
internal male genitalia | 9.46e-18 | 3 |
duct of male reproductive system | 1.13e-13 | 4 |
stroma | 1.29e-13 | 4 |
cornea | 1.29e-13 | 4 |
eye surface | 1.29e-13 | 4 |
optic eminence | 1.29e-13 | 4 |
corneal primordium | 1.29e-13 | 4 |
occipital lobe | 2.94e-11 | 5 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |