FFCP PHASE2:Hg19::chr15:55700522..55700573,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:161582,entrezgene:9236 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=H...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=161582,9236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21493,24227,43019 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9ULG6 | ||
|association_with_transcript=0bp_to_ENST00000310958,ENST00000425574,NM_004748,uc002acv.1,uc002acw.1,uc002acx.2,uc010bfk.1_5end | |association_with_transcript=0bp_to_ENST00000310958,ENST00000425574,NM_004748,uc002acv.1,uc002acw.1,uc002acx.2,uc010bfk.1_5end | ||
|cluster_id=chr15:55700522..55700573,- | |cluster_id=chr15:55700522..55700573,- |
Latest revision as of 04:18, 18 September 2015
Short description: | p2@CCPG1, p2@DYX1C1-CCPG1, p2@DYX1C1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCPG1_5end, CAGE_peak_2_at_DYX1C1-CCPG1_5end, CAGE_peak_2_at_DYX1C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000310958, ENST00000425574, NM_004748, uc002acv.1, uc002acw.1, uc002acx.2, uc010bfk.1_5end |
EntrezGene: | 161582,9236 |
HGNC: | 24227, 43019&submit=Submit 21493, 24227, 43019 |
UniProt: | Q9ULG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@CCPG1p2@DYX1C1-CCPG1p2@DYX1C1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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adult organism | 3.68e-23 | 114 |
neural tube | 1.42e-10 | 56 |
neural rod | 1.42e-10 | 56 |
future spinal cord | 1.42e-10 | 56 |
neural keel | 1.42e-10 | 56 |
regional part of forebrain | 1.63e-10 | 41 |
forebrain | 1.63e-10 | 41 |
anterior neural tube | 1.63e-10 | 41 |
future forebrain | 1.63e-10 | 41 |
regional part of nervous system | 4.59e-10 | 53 |
Showing 1 to 10 of 21 entries