FFCP PHASE1:Hg19::chr10:43633970..43633986,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:43633970..43633986,+ to FFCP PHASE1:Hg19::chr10:43633970..43633986,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55454 | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24292 | |HGNC=24292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6G5 | |UniProt=Q8N6G5 | ||
|association_with_transcript=36bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |||
|cluster_id=chr10:43633970..43633986,+ | |||
|coexpression_cluster_id=C3017 | |||
|description=CAGE_peak_4_at_CSGALNACT2_5end | |||
|id=chr10:43633970..43633986,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.49e-34!140;CL:0000766!3.98e-31!76;CL:0002031!4.76e-30!124;CL:0000557!1.35e-29!71;CL:0000839!2.32e-28!70;CL:0002087!3.12e-28!119;CL:0002057!8.91e-28!42;CL:0002009!1.91e-27!65;CL:0002194!2.06e-26!63;CL:0000576!2.06e-26!63;CL:0000040!2.06e-26!63;CL:0000559!2.06e-26!63;CL:0000860!1.54e-24!45;CL:0000037!9.64e-24!172;CL:0000566!9.64e-24!172;CL:0000988!1.69e-22!182;CL:0002032!3.29e-21!165;CL:0000837!3.29e-21!165;CL:0000763!2.41e-17!112;CL:0000049!2.41e-17!112;CL:0000134!2.78e-16!358;CL:0002320!1.36e-15!365;CL:0000048!9.22e-14!430;CL:0000723!3.07e-13!436;CL:0000034!3.17e-13!444;CL:0000219!1.33e-12!390;CL:0000791!2.27e-09!18;CL:0000789!2.27e-09!18;CL:0002420!2.27e-09!18;CL:0002419!2.27e-09!18;CL:0000790!2.27e-09!18;CL:0000084!2.36e-07!25;CL:0000827!2.36e-07!25;CL:0002393!3.22e-07!9;CL:0002397!3.22e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-26;33!CL:0002057;2.54e-26;33!CL:0000473;2.01e-23;39!CL:0000234;2.01e-23;39!CL:0000576;2.98e-22;48!CL:0000766;9.90e-19;69!CL:0000791;8.08e-12;18!CL:0000789;8.08e-12;18!CL:0002419;8.08e-12;18!CL:0002087;5.90e-11;104!CL:0000738;2.07e-09;136!CL:0000084;3.95e-08;25!CL:0000625;6.74e-08;11!CL:0000763;1.39e-07;100!CL:0000219;9.55e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.50e-43,72;CL:0000738,7.38e-43,136;CL:0000557,1.06e-40,67;CL:0000839,5.36e-39,66;CL:0002009,7.19e-38,61;CL:0000473,7.59e-38,48;CL:0000234,7.59e-38,48;CL:0002031,1.93e-37,120;CL:0000860,1.71e-36,42;CL:0002057,1.71e-36,42;CL:0002194,1.76e-36,59;CL:0000576,1.76e-36,59;CL:0000040,1.76e-36,59;CL:0000559,1.76e-36,59;CL:0002087,1.00e-34,115;CL:0000037,8.42e-32,168;CL:0000988,2.13e-31,177;CL:0002032,7.47e-29,161;CL:0000837,7.47e-29,161;CL:0000763,1.20e-26,108;CL:0000049,1.20e-26,108;CL:0000134,9.21e-23,354;CL:0002320,1.36e-21,361;CL:0000048,8.37e-19,427;CL:0000034,2.21e-18,441;CL:0000723,3.65e-18,433;CL:0000219,2.61e-17,386;CL:0000791,5.92e-12,18;CL:0000789,5.92e-12,18;CL:0002420,5.92e-12,18;CL:0002419,5.92e-12,18;CL:0000790,5.92e-12,18;CL:0002393,4.26e-09,9;CL:0002397,4.26e-09,9;CL:0000084,3.42e-08,25;CL:0000827,3.42e-08,25;CL:0000625,5.95e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-26;42!CL:0000790;8.08e-12;18!CL:0000049;6.74e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.62e-33!102;UBERON:0003061!3.62e-33!102;UBERON:0002193!1.44e-27!112;UBERON:0002371!2.66e-27!80;UBERON:0001474!9.10e-26!86;UBERON:0004765!3.63e-24!101;UBERON:0001434!3.63e-24!101;UBERON:0002384!2.20e-15!375;UBERON:0002405!2.26e-15!115;UBERON:0002204!8.26e-14!167;UBERON:0003081!4.00e-07!216;UBERON:0000178!5.51e-07!15;UBERON:0000179!5.51e-07!15;UBERON:0000463!5.51e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-08;15!UBERON:0000179;2.40e-08;15!UBERON:0000463;2.40e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.62e-42,98;UBERON:0003061,1.62e-42,98;UBERON:0002193,2.21e-36,108;UBERON:0002371,1.08e-35,76;UBERON:0001474,1.93e-33,82;UBERON:0004765,8.89e-31,90;UBERON:0002405,1.60e-28,93;UBERON:0001434,2.02e-27,100;UBERON:0002384,8.74e-21,371;UBERON:0002204,1.08e-14,167;UBERON:0003081,2.20e-13,203;UBERON:0000178,8.70e-09,15;UBERON:0000179,8.70e-09,15;UBERON:0000463,8.70e-09,15 | |||
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| ||
|short_description=p4@CSGALNACT2 | |||
}} | }} |
Latest revision as of 05:42, 18 September 2015
Short description: | p4@CSGALNACT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSGALNACT2_5end |
Coexpression cluster: | C3017_CD14_CD14CD16_Eosinophils_Mast_Neutrophils_Basophils_CD34 |
Association with transcript: | 36bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
EntrezGene: | CSGALNACT2 |
HGNC: | 24292 |
UniProt: | Q8N6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.62e-42 | 98 |
blood island | 1.62e-42 | 98 |
hemolymphoid system | 2.21e-36 | 108 |
bone marrow | 1.08e-35 | 76 |
bone element | 1.93e-33 | 82 |
skeletal element | 8.89e-31 | 90 |
immune system | 1.60e-28 | 93 |
skeletal system | 2.02e-27 | 100 |
connective tissue | 8.74e-21 | 371 |
musculoskeletal system | 1.08e-14 | 167 |
lateral plate mesoderm | 2.20e-13 | 203 |
blood | 8.70e-09 | 15 |
haemolymphatic fluid | 8.70e-09 | 15 |
organism substance | 8.70e-09 | 15 |