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FFCP PHASE1:Hg19::chr5:57787254..57787271,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=202309
|EntrezGene=202309
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=26588
|HGNC=26588
|TSSclassifier=strong
|UniProt=Q8N292,D6RA63,D6RBK7
|UniProt=Q8N292,D6RA63,D6RBK7
|association_with_transcript=0bp_to_ENST00000396776,ENST00000502276,ENST00000511930_5end
|association_with_transcript=0bp_to_ENST00000396776,ENST00000502276,ENST00000511930_5end
|cluster_id=chr5:57787254..57787271,+
|description=CAGE_peak_2_at_GAPT_5end
|description=CAGE_peak_2_at_GAPT_5end
|id=chr5:57787254..57787271,+
|id=chr5:57787254..57787271,+
|ontology_enrichment_celltype=CL:0000037!9.30e-71!172;CL:0000566!9.30e-71!172;CL:0002032!9.54e-66!165;CL:0000837!9.54e-66!165;CL:0000988!1.52e-64!182;CL:0000763!8.04e-64!112;CL:0000049!8.04e-64!112;CL:0000738!1.11e-54!140;CL:0000766!2.00e-52!76;CL:0000839!2.02e-46!70;CL:0002031!2.83e-45!124;CL:0000557!1.87e-43!71;CL:0002057!1.56e-41!42;CL:0002087!2.85e-41!119;CL:0002194!9.68e-39!63;CL:0000576!9.68e-39!63;CL:0000040!9.68e-39!63;CL:0000559!9.68e-39!63;CL:0002009!1.78e-38!65;CL:0000860!1.27e-37!45;CL:0000134!8.04e-14!358;CL:0002320!6.45e-13!365;CL:0000236!2.07e-12!14;CL:0000945!1.72e-11!24;CL:0000826!1.72e-11!24;CL:0000219!7.91e-10!390;CL:0002393!8.13e-09!9;CL:0002397!8.13e-09!9;CL:0000094!8.41e-09!8;CL:0002274!9.90e-08!5;CL:0000457!9.90e-08!5;CL:0002191!9.90e-08!5;CL:0000097!9.90e-08!5;CL:0000831!9.90e-08!5;CL:0002028!9.90e-08!5
|ontology_enrichment_celltype=CL:0000037!9.30e-71!172;CL:0000566!9.30e-71!172;CL:0002032!9.54e-66!165;CL:0000837!9.54e-66!165;CL:0000988!1.52e-64!182;CL:0000763!8.04e-64!112;CL:0000049!8.04e-64!112;CL:0000738!1.11e-54!140;CL:0000766!2.00e-52!76;CL:0000839!2.02e-46!70;CL:0002031!2.83e-45!124;CL:0000557!1.87e-43!71;CL:0002057!1.56e-41!42;CL:0002087!2.85e-41!119;CL:0002194!9.68e-39!63;CL:0000576!9.68e-39!63;CL:0000040!9.68e-39!63;CL:0000559!9.68e-39!63;CL:0002009!1.78e-38!65;CL:0000860!1.27e-37!45;CL:0000134!8.04e-14!358;CL:0002320!6.45e-13!365;CL:0000236!2.07e-12!14;CL:0000945!1.72e-11!24;CL:0000826!1.72e-11!24;CL:0000219!7.91e-10!390;CL:0002393!8.13e-09!9;CL:0002397!8.13e-09!9;CL:0000094!8.41e-09!8;CL:0002274!9.90e-08!5;CL:0000457!9.90e-08!5;CL:0002191!9.90e-08!5;CL:0000097!9.90e-08!5;CL:0000831!9.90e-08!5;CL:0002028!9.90e-08!5
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-45;33!CL:0002057;3.26e-45;33!CL:0000576;2.45e-39;48!CL:0000473;1.93e-36;39!CL:0000234;1.93e-36;39!CL:0000766;2.58e-35;69!CL:0000763;5.09e-32;100!CL:0000236;2.49e-15;13!CL:0000738;9.72e-15;136!CL:0002087;2.76e-14;104!CL:0000988;4.47e-14;177!CL:0000094;3.12e-12;8!CL:0000097;9.86e-11;5!CL:0000081;1.86e-08;11!CL:0002393;2.42e-08;6!CL:0002397;2.42e-08;6!CL:0000945;3.14e-08;24
|ontology_enrichment_celltype_v019_2=CL:0000763,6.81e-94,108;CL:0000049,6.81e-94,108;CL:0000037,2.19e-89,168;CL:0000988,1.94e-83,177;CL:0002032,4.54e-82,161;CL:0000837,4.54e-82,161;CL:0000766,8.22e-79,72;CL:0000839,9.00e-70,66;CL:0000738,1.06e-64,136;CL:0000557,2.00e-63,67;CL:0000860,3.91e-61,42;CL:0002057,3.91e-61,42;CL:0000473,4.01e-60,48;CL:0000234,4.01e-60,48;CL:0002194,3.80e-58,59;CL:0000576,3.80e-58,59;CL:0000040,3.80e-58,59;CL:0000559,3.80e-58,59;CL:0002009,9.70e-56,61;CL:0002031,1.97e-52,120;CL:0002087,3.11e-48,115;CL:0000134,7.22e-28,354;CL:0002320,8.55e-27,361;CL:0000219,5.06e-23,386;CL:0000034,4.00e-19,441;CL:0000048,1.95e-18,427;CL:0000723,8.32e-18,433;CL:0000236,4.92e-14,14;CL:0002393,2.43e-12,9;CL:0002397,2.43e-12,9;CL:0000094,2.55e-12,8;CL:0000097,9.87e-11,5;CL:0002028,9.87e-11,5;CL:0000081,1.62e-08,11;CL:0000945,2.94e-08,24;CL:0000826,2.94e-08,24
|ontology_enrichment_development_v019=CL:0002057;7.13e-44;42!CL:0000049;6.86e-26;108
|ontology_enrichment_disease=DOID:8692!1.15e-14!31;DOID:1240!4.41e-12!39;DOID:2531!2.11e-10!51;DOID:0060083!2.11e-10!51
|ontology_enrichment_disease_v019=DOID:8692;2.59e-21;31!DOID:1240;7.03e-15;39!DOID:2531;1.34e-08;51!DOID:0060083;1.34e-08;51
|ontology_enrichment_disease_v019_2=DOID:8692,1.21e-22,31;DOID:1240,3.36e-18,39;DOID:2531,1.81e-13,51;DOID:0060083,1.81e-13,51
|ontology_enrichment_uberon=UBERON:0002390!1.87e-45!102;UBERON:0003061!1.87e-45!102;UBERON:0002193!1.56e-41!112;UBERON:0002371!9.24e-38!80;UBERON:0001474!1.43e-33!86;UBERON:0002405!1.53e-26!115;UBERON:0004765!2.25e-25!101;UBERON:0001434!2.25e-25!101;UBERON:0007023!3.68e-16!115;UBERON:0003081!8.45e-13!216;UBERON:0002384!4.38e-12!375;UBERON:0002204!8.72e-10!167;UBERON:0000178!1.78e-07!15;UBERON:0000179!1.78e-07!15;UBERON:0000463!1.78e-07!15
|ontology_enrichment_uberon=UBERON:0002390!1.87e-45!102;UBERON:0003061!1.87e-45!102;UBERON:0002193!1.56e-41!112;UBERON:0002371!9.24e-38!80;UBERON:0001474!1.43e-33!86;UBERON:0002405!1.53e-26!115;UBERON:0004765!2.25e-25!101;UBERON:0001434!2.25e-25!101;UBERON:0007023!3.68e-16!115;UBERON:0003081!8.45e-13!216;UBERON:0002384!4.38e-12!375;UBERON:0002204!8.72e-10!167;UBERON:0000178!1.78e-07!15;UBERON:0000179!1.78e-07!15;UBERON:0000463!1.78e-07!15
|ontology_enrichment_uberon_v019=UBERON:0000178;3.69e-11;15!UBERON:0000179;3.69e-11;15!UBERON:0000463;3.69e-11;15!UBERON:0002390;4.04e-07;32
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.05e-67,98;UBERON:0003061,4.05e-67,98;UBERON:0002193,1.42e-62,108;UBERON:0002371,2.69e-56,76;UBERON:0002405,2.02e-51,93;UBERON:0001474,6.56e-51,82;UBERON:0004765,7.58e-45,90;UBERON:0001434,1.22e-38,100;UBERON:0002384,2.48e-25,371;UBERON:0003081,1.08e-22,203;UBERON:0002204,1.51e-16,167;UBERON:0000178,3.95e-11,15;UBERON:0000179,3.95e-11,15;UBERON:0000463,3.95e-11,15;UBERON:0000926,3.81e-08,315;UBERON:0004120,3.81e-08,315;UBERON:0006603,3.81e-08,315
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|short_description=p2@GAPT
|short_description=p2@GAPT
}}
}}

Latest revision as of 06:26, 18 September 2015

Short description:p2@GAPT
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_GAPT_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000396776, ENST00000502276, ENST00000511930_5end
EntrezGene:GAPT
HGNC: 26588
UniProt: Q8N292D6RA63D6RBK7
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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