FFCP PHASE1:Hg19::chr17:79479285..79479321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=71 | |EntrezGene=71 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=144 | |HGNC=144 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PJ43 | |UniProt=Q6PJ43 | ||
|association_with_transcript=-109bp_to_uc002kai.1_5end | |association_with_transcript=-109bp_to_uc002kai.1_5end | ||
|cluster_id=chr17:79479285..79479321,- | |||
|coexpression_cluster_id=C845 | |||
|description=CAGE_peak_2_at_ACTG1_5end | |description=CAGE_peak_2_at_ACTG1_5end | ||
|id=chr17:79479285..79479321,- | |id=chr17:79479285..79479321,- | ||
|ontology_enrichment_celltype=CL:0000055!2.88e-17!180;CL:0002321!5.19e-16!248;CL:0000220!1.19e-15!246;CL:0000144!2.83e-15!625;CL:0000548!6.63e-15!679;CL:0000004!6.63e-15!679;CL:0000255!6.63e-15!679;CL:0002371!1.73e-14!591;CL:0000012!5.12e-14!682;CL:0000222!5.25e-14!119;CL:0000393!7.82e-10!60;CL:0000211!7.82e-10!60;CL:0000183!9.37e-10!59;CL:0000680!1.26e-08!57;CL:0000056!1.26e-08!57;CL:0000355!1.26e-08!57;CL:0000187!2.49e-08!54;CL:0000057!4.33e-08!75;CL:0000003!9.22e-08!722;CL:0000192!9.48e-08!42;CL:0000514!9.48e-08!42;CL:0000359!6.27e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.88e-17!180;CL:0002321!5.19e-16!248;CL:0000220!1.19e-15!246;CL:0000144!2.83e-15!625;CL:0000548!6.63e-15!679;CL:0000004!6.63e-15!679;CL:0000255!6.63e-15!679;CL:0002371!1.73e-14!591;CL:0000012!5.12e-14!682;CL:0000222!5.25e-14!119;CL:0000393!7.82e-10!60;CL:0000211!7.82e-10!60;CL:0000183!9.37e-10!59;CL:0000680!1.26e-08!57;CL:0000056!1.26e-08!57;CL:0000355!1.26e-08!57;CL:0000187!2.49e-08!54;CL:0000057!4.33e-08!75;CL:0000003!9.22e-08!722;CL:0000192!9.48e-08!42;CL:0000514!9.48e-08!42;CL:0000359!6.27e-07!32 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.67e-16,250;CL:0000222,1.61e-14,121;CL:0000393,4.89e-10,61;CL:0000211,4.89e-10,61;CL:0000680,7.99e-09,58;CL:0000056,7.99e-09,58;CL:0000355,7.99e-09,58;CL:0000187,1.57e-08,55;CL:0000057,4.94e-08,76;CL:0000192,5.97e-08,43;CL:0000514,5.97e-08,43;CL:0000359,6.27e-07,32;CL:0000213,6.41e-07,58;CL:0000215,6.41e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.07e-12!79;UBERON:0007798!5.07e-12!79;UBERON:0001981!6.46e-11!60;UBERON:0007500!6.46e-11!60;UBERON:0004537!6.46e-11!60;UBERON:0006965!6.46e-11!60;UBERON:0003914!1.82e-10!118;UBERON:0004872!2.06e-10!84;UBERON:0001637!2.82e-10!42;UBERON:0003509!2.82e-10!42;UBERON:0004572!2.82e-10!42;UBERON:0000055!3.64e-10!69;UBERON:0000486!8.04e-10!82;UBERON:0000914!1.15e-09!83;UBERON:0002329!1.15e-09!83;UBERON:0003077!1.15e-09!83;UBERON:0003059!1.15e-09!83;UBERON:0007282!1.15e-09!83;UBERON:0009618!1.15e-09!83;UBERON:0007285!1.15e-09!83;UBERON:0005256!1.33e-09!143;UBERON:0004290!3.30e-09!70;UBERON:0000468!9.02e-09!659;UBERON:0004535!3.06e-08!110;UBERON:0000490!6.41e-08!138;UBERON:0000926!8.12e-08!448;UBERON:0004120!8.12e-08!448;UBERON:0006603!8.12e-08!448;UBERON:0001009!1.62e-07!113;UBERON:0001134!2.07e-07!61;UBERON:0002036!2.07e-07!61;UBERON:0003082!2.07e-07!61;UBERON:0004573!2.37e-07!33;UBERON:0004571!2.37e-07!33;UBERON:0002385!5.03e-07!63;UBERON:0001015!5.03e-07!63;UBERON:0000383!5.03e-07!63;UBERON:0002100!5.28e-07!216 | |ontology_enrichment_uberon=UBERON:0002049!5.07e-12!79;UBERON:0007798!5.07e-12!79;UBERON:0001981!6.46e-11!60;UBERON:0007500!6.46e-11!60;UBERON:0004537!6.46e-11!60;UBERON:0006965!6.46e-11!60;UBERON:0003914!1.82e-10!118;UBERON:0004872!2.06e-10!84;UBERON:0001637!2.82e-10!42;UBERON:0003509!2.82e-10!42;UBERON:0004572!2.82e-10!42;UBERON:0000055!3.64e-10!69;UBERON:0000486!8.04e-10!82;UBERON:0000914!1.15e-09!83;UBERON:0002329!1.15e-09!83;UBERON:0003077!1.15e-09!83;UBERON:0003059!1.15e-09!83;UBERON:0007282!1.15e-09!83;UBERON:0009618!1.15e-09!83;UBERON:0007285!1.15e-09!83;UBERON:0005256!1.33e-09!143;UBERON:0004290!3.30e-09!70;UBERON:0000468!9.02e-09!659;UBERON:0004535!3.06e-08!110;UBERON:0000490!6.41e-08!138;UBERON:0000926!8.12e-08!448;UBERON:0004120!8.12e-08!448;UBERON:0006603!8.12e-08!448;UBERON:0001009!1.62e-07!113;UBERON:0001134!2.07e-07!61;UBERON:0002036!2.07e-07!61;UBERON:0003082!2.07e-07!61;UBERON:0004573!2.37e-07!33;UBERON:0004571!2.37e-07!33;UBERON:0002385!5.03e-07!63;UBERON:0001015!5.03e-07!63;UBERON:0000383!5.03e-07!63;UBERON:0002100!5.28e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.61e-08;42!UBERON:0003509;9.61e-08;42!UBERON:0004572;9.61e-08;42!UBERON:0003914;7.14e-07;74!UBERON:0007500;7.86e-07;56!UBERON:0001981;7.86e-07;56!UBERON:0004537;7.86e-07;56!UBERON:0004573;8.44e-07;33!UBERON:0004571;8.44e-07;33 | |||
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| ||
|short_description=p2@ACTG1 | |short_description=p2@ACTG1 | ||
}} | }} |
Latest revision as of 07:25, 18 September 2015
Short description: | p2@ACTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACTG1_5end |
Coexpression cluster: | C845_Alveolar_Hair_Olfactory_Osteoblast_Endothelial_Fibroblast_Smooth |
Association with transcript: | -109bp_to_uc002kai.1_5end |
EntrezGene: | ACTG1 |
HGNC: | 144 |
UniProt: | Q6PJ43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.67e-16 | 250 |
mesodermal cell | 1.61e-14 | 121 |
electrically responsive cell | 4.89e-10 | 61 |
electrically active cell | 4.89e-10 | 61 |
muscle precursor cell | 7.99e-09 | 58 |
myoblast | 7.99e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.99e-09 | 58 |
muscle cell | 1.57e-08 | 55 |
fibroblast | 4.94e-08 | 76 |
smooth muscle cell | 5.97e-08 | 43 |
smooth muscle myoblast | 5.97e-08 | 43 |
vascular associated smooth muscle cell | 6.27e-07 | 32 |
lining cell | 6.41e-07 | 58 |
barrier cell | 6.41e-07 | 58 |