FFCP PHASE1:Hg19::chr1:45988520..45988529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5052 | |EntrezGene=5052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9352 | |HGNC=9352 | ||
|TSSclassifier=strong | |||
|UniProt=Q06830 | |UniProt=Q06830 | ||
|association_with_transcript=32bp_to_NM_001202431_5end | |association_with_transcript=32bp_to_NM_001202431_5end | ||
|cluster_id=chr1:45988520..45988529,- | |||
|description=CAGE_peak_5_at_PRDX1_5end | |description=CAGE_peak_5_at_PRDX1_5end | ||
|id=chr1:45988520..45988529,- | |id=chr1:45988520..45988529,- | ||
|ontology_enrichment_celltype=CL:0000066!6.56e-13!254;CL:0002150!9.89e-13!3;CL:0000861!9.89e-13!3;CL:0000039!3.94e-09!7;CL:0000586!3.94e-09!7 | |ontology_enrichment_celltype=CL:0000066!6.56e-13!254;CL:0002150!9.89e-13!3;CL:0000861!9.89e-13!3;CL:0000039!3.94e-09!7;CL:0000586!3.94e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.62e-23;1!CL:0000039;1.39e-13;7!CL:0000586;1.39e-13;7!CL:0000159;2.31e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.07e-23,1;CL:0000039,1.08e-13,7;CL:0000586,1.08e-13,7;CL:0000159,1.48e-12,2;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.45e-10;10!UBERON:0005564;8.45e-10;10!UBERON:0008947;1.70e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.59e-34!106;DOID:0050687!1.65e-28!143;DOID:162!7.45e-17!235;DOID:14566!2.64e-16!239 | |ontology_enrichment_disease=DOID:305!1.59e-34!106;DOID:0050687!1.65e-28!143;DOID:162!7.45e-17!235;DOID:14566!2.64e-16!239 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.62e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.07e-23,1;DOID:305,1.31e-16,106;DOID:0050687,2.95e-12,143;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.41e-33!9;UBERON:0001557!1.23e-14!19;UBERON:0008947!6.16e-14!38;UBERON:0003258!6.16e-14!38;UBERON:0001041!1.02e-12!98;UBERON:0000077!1.74e-12!130;UBERON:0000072!5.37e-11!46;UBERON:0004921!2.92e-10!129;UBERON:0004185!2.92e-10!129;UBERON:0004119!5.87e-10!169;UBERON:0000925!5.87e-10!169;UBERON:0006595!5.87e-10!169;UBERON:0001004!1.49e-09!72;UBERON:0001007!1.80e-09!155;UBERON:0001555!1.80e-09!155;UBERON:0007026!1.80e-09!155;UBERON:0000065!3.67e-09!53;UBERON:0005631!7.28e-09!14;UBERON:0000158!7.28e-09!14;UBERON:0003124!1.78e-08!7 | |ontology_enrichment_uberon=UBERON:0001737!7.41e-33!9;UBERON:0001557!1.23e-14!19;UBERON:0008947!6.16e-14!38;UBERON:0003258!6.16e-14!38;UBERON:0001041!1.02e-12!98;UBERON:0000077!1.74e-12!130;UBERON:0000072!5.37e-11!46;UBERON:0004921!2.92e-10!129;UBERON:0004185!2.92e-10!129;UBERON:0004119!5.87e-10!169;UBERON:0000925!5.87e-10!169;UBERON:0006595!5.87e-10!169;UBERON:0001004!1.49e-09!72;UBERON:0001007!1.80e-09!155;UBERON:0001555!1.80e-09!155;UBERON:0007026!1.80e-09!155;UBERON:0000065!3.67e-09!53;UBERON:0005631!7.28e-09!14;UBERON:0000158!7.28e-09!14;UBERON:0003124!1.78e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-12;8!UBERON:0001737;8.78e-11;9!UBERON:0001557;8.78e-11;9!UBERON:0003135;5.41e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.18e-12,8;UBERON:0001737,9.23e-11,9;UBERON:0003135,4.61e-09,11 | |||
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| ||
|short_description=p5@PRDX1 | |short_description=p5@PRDX1 | ||
}} | }} |
Latest revision as of 07:54, 18 September 2015
Short description: | p5@PRDX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRDX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_NM_001202431_5end |
EntrezGene: | PRDX1 |
HGNC: | 9352 |
UniProt: | Q06830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.07e-23 | 1 |
germ line cell | 1.08e-13 | 7 |
germ cell | 1.08e-13 | 7 |
seromucus secreting cell | 1.48e-12 | 2 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
testis | 4.18e-12 | 8 |
larynx | 9.23e-11 | 9 |
male reproductive organ | 4.61e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.07e-23 | 1 |
carcinoma | 1.31e-16 | 106 |
cell type cancer | 2.95e-12 | 143 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |