FFCP PHASE1:Hg19::chr1:164528410..164528428,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000485769_5end | |association_with_transcript=-8bp_to_ENST00000485769_5end | ||
|cluster_id=chr1:164528410..164528428,+ | |||
|coexpression_cluster_id=C2536 | |coexpression_cluster_id=C2536 | ||
|description=CAGE_peak_1_at_PBX1_5end | |description=CAGE_peak_1_at_PBX1_5end | ||
Latest revision as of 09:07, 18 September 2015
| Short description: | p1@PBX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PBX1_5end |
| Coexpression cluster: | C2536_cervix_occipital_breast_parietal_uterus_smooth_temporal |
| Association with transcript: | -8bp_to_ENST00000485769_5end |
| EntrezGene: | PBX1 |
| HGNC: | 8632 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@PBX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.33e-30 | 114 |
| organ system subdivision | 1.34e-21 | 223 |
| ectoderm-derived structure | 2.99e-18 | 171 |
| ectoderm | 2.99e-18 | 171 |
| presumptive ectoderm | 2.99e-18 | 171 |
| central nervous system | 4.79e-18 | 81 |
| neurectoderm | 9.84e-17 | 86 |
| nervous system | 1.68e-16 | 89 |
| neural plate | 2.65e-16 | 82 |
| presumptive neural plate | 2.65e-16 | 82 |
Showing 1 to 10 of 52 entries
