FFCP PHASE1:Hg19::chr6:35109080..35109134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6954 | |EntrezGene=6954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11658 | |HGNC=11658 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP29,D6RBE4,B7Z7B5,Q8WWU5,D6R8Y5,D6RGY5,D6RAC0,D6R9D8,D6RGC0,D6R9R9,D6RFY8,D6R989 | |UniProt=E7EP29,D6RBE4,B7Z7B5,Q8WWU5,D6R8Y5,D6RGY5,D6RAC0,D6R9D8,D6RGC0,D6R9R9,D6RFY8,D6R989 | ||
|association_with_transcript=0bp_to_ENST00000373979,ENST00000394696,ENST00000412155,ENST00000427376,ENST00000444780,ENST00000445851,ENST00000455706,ENST00000469514,ENST00000486638,ENST00000492680,ENST00000503908,ENST00000505335,ENST00000505400,ENST00000507706,ENST00000509988,ENST00000510465,ENST00000514751_5end | |association_with_transcript=0bp_to_ENST00000373979,ENST00000394696,ENST00000412155,ENST00000427376,ENST00000444780,ENST00000445851,ENST00000455706,ENST00000469514,ENST00000486638,ENST00000492680,ENST00000503908,ENST00000505335,ENST00000505400,ENST00000507706,ENST00000509988,ENST00000510465,ENST00000514751_5end | ||
|cluster_id=chr6:35109080..35109134,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_TCP11_5end | |description=CAGE_peak_1_at_TCP11_5end | ||
|id=chr6:35109080..35109134,- | |id=chr6:35109080..35109134,- | ||
|ontology_enrichment_celltype=CL:0002032;5.56e-11;1!CL:0000557;5.56e-11;1!CL:0000037;1.10e-10;1!CL:0001024;1.10e-10;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002032;5.56e-11;1!CL:0000557;5.56e-11;1!CL:0000037;1.10e-10;1!CL:0001024;1.10e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.33e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.80e-09;10!UBERON:0005564;1.80e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003135;1.39e-14;11!UBERON:0000473;1.04e-11;8!UBERON:0001301;3.58e-11;1!UBERON:0005795;1.10e-10;1!UBERON:0003101;2.27e-07;22!UBERON:0000079;2.27e-07;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!4.57e-07!6;UBERON:0003293!4.57e-07!6;UBERON:0003294!4.57e-07!6;UBERON:0010047!4.57e-07!6;UBERON:0000167!4.57e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.39e-14;11!UBERON:0000473;1.04e-11;8!UBERON:0001301;3.58e-11;1!UBERON:0005795;1.10e-10;1!UBERON:0003101;2.27e-07;22!UBERON:0000079;2.27e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.39e-14,11;UBERON:0000473,1.05e-11,8;UBERON:0001301,3.41e-11,1;UBERON:0003101,2.27e-07,22;UBERON:0000079,2.27e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,124.888548487069,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,1.00883967391873,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0.614321404198464,0,0,0,0,0,0.398495976502139,0,4.53478946137697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,7.16379339792324,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.533937062838473,1.25763444079733,0.414239055347196,0,0,0.121792598380896,0,0,1.5041393641362,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,2.42786241694653,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8682940277668,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0,7.0198111001865,309.48020352329,405.697693056454,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0,0.134704106029175,0.502055437748735,0.665320713092027,0,0,0,0.0898252021065869,0,0.366724332548599,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,124.888548487069,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,1.00883967391873,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0.614321404198464,0,0,0,0,0,0.398495976502139,0,4.53478946137697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,7.16379339792324,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.533937062838473,1.25763444079733,0.414239055347196,0,0,0.121792598380896,0,0,1.5041393641362,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,2.42786241694653,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8682940277668,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0,7.0198111001865,309.48020352329,405.697693056454,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0,0.134704106029175,0.502055437748735,0.665320713092027,0,0,0,0.0898252021065869,0,0.366724332548599,1.22068853494722,0,0,0 | ||
|short_description=p1@TCP11 | |short_description=p1@TCP11 | ||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p1@TCP11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCP11_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000373979, ENST00000394696, ENST00000412155, ENST00000427376, ENST00000444780, ENST00000445851, ENST00000455706, ENST00000469514, ENST00000486638, ENST00000492680, ENST00000503908, ENST00000505335, ENST00000505400, ENST00000507706, ENST00000509988, ENST00000510465, ENST00000514751_5end |
EntrezGene: | TCP11 |
HGNC: | 11658 |
UniProt: | E7EP29D6RBE4B7Z7B5Q8WWU5D6R8Y5D6RGY5D6RAC0D6R9D8D6RGC0D6R9R9D6RFY8D6R989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.39e-14 | 11 |
testis | 1.05e-11 | 8 |
epididymis | 3.41e-11 | 1 |
male organism | 2.27e-07 | 22 |
male reproductive system | 2.27e-07 | 22 |