FFCP PHASE1:Hg19::chr21:40033695..40033712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2078 | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3446 | |HGNC=3446 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN83,P11308 | |UniProt=B4DN83,P11308 | ||
|association_with_transcript=0bp_to_ENST00000442448,NM_001136154,NM_004449,uc002yxb.2,uc002yxc.3,uc010gnz.2,uc011ael.1_5end | |association_with_transcript=0bp_to_ENST00000442448,NM_001136154,NM_004449,uc002yxb.2,uc002yxc.3,uc010gnz.2,uc011ael.1_5end | ||
|cluster_id=chr21:40033695..40033712,- | |||
|coexpression_cluster_id=C4077 | |coexpression_cluster_id=C4077 | ||
|description=CAGE_peak_6_at_ERG_5end | |description=CAGE_peak_6_at_ERG_5end | ||
|id=chr21:40033695..40033712,- | |id=chr21:40033695..40033712,- | ||
|ontology_enrichment_celltype=CL:0000153!4.43e-15!9;CL:0000447!4.43e-15!9;CL:0000667!1.17e-09!6;CL:0000058!1.17e-09!6;CL:0000138!1.17e-09!6;CL:0000327!4.92e-09!14;CL:0000499!1.09e-08!27;CL:0000214!3.68e-07!3;CL:0002615!4.07e-07!3 | |ontology_enrichment_celltype=CL:0000153!4.43e-15!9;CL:0000447!4.43e-15!9;CL:0000667!1.17e-09!6;CL:0000058!1.17e-09!6;CL:0000138!1.17e-09!6;CL:0000327!4.92e-09!14;CL:0000499!1.09e-08!27;CL:0000214!3.68e-07!3;CL:0002615!4.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000153;3.81e-49;9!CL:0000447;3.81e-49;9!CL:0000138;1.73e-38;6!CL:0000327;2.92e-29;15!CL:0000499;6.80e-20;28!CL:0000214;5.81e-13;3!CL:0000151;4.58e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,5.08e-49,9;CL:0000447,5.08e-49,9;CL:0000058,2.18e-38,6;CL:0000138,2.18e-38,6;CL:0000327,3.47e-29,15;CL:0000499,7.34e-20,28;CL:0000214,6.17e-13,3;CL:0000151,9.18e-12,36 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.73e-10;1!UBERON:0010115;1.73e-10;1!UBERON:0005062;8.19e-10;4!UBERON:0007284;8.19e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!2.62e-15!12;UBERON:0000042!2.62e-15!12;UBERON:0007023!8.41e-09!115;UBERON:0003688!1.45e-08!6;UBERON:0002358!1.45e-08!6;UBERON:0003684!1.45e-08!6;UBERON:0001178!1.45e-08!6;UBERON:0004923!1.68e-07!57;UBERON:0006915!3.68e-07!3;UBERON:0002018!3.68e-07!3;UBERON:0002217!3.68e-07!3;UBERON:0007616!3.68e-07!3 | |ontology_enrichment_uberon=UBERON:0004457!2.62e-15!12;UBERON:0000042!2.62e-15!12;UBERON:0007023!8.41e-09!115;UBERON:0003688!1.45e-08!6;UBERON:0002358!1.45e-08!6;UBERON:0003684!1.45e-08!6;UBERON:0001178!1.45e-08!6;UBERON:0004923!1.68e-07!57;UBERON:0006915!3.68e-07!3;UBERON:0002018!3.68e-07!3;UBERON:0002217!3.68e-07!3;UBERON:0007616!3.68e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.13e-16;9!UBERON:0000042;2.13e-16;9!UBERON:0006915;5.81e-13;3!UBERON:0007616;5.81e-13;3!UBERON:0002217;5.81e-13;3!UBERON:0002018;5.81e-13;3!UBERON:0003978;8.87e-13;3!UBERON:0000946;8.87e-13;3!UBERON:0002363;1.73e-10;1!UBERON:0002135;3.29e-10;1!UBERON:0002146;3.29e-10;1!UBERON:0005623;3.29e-10;1!UBERON:0003688;4.73e-07;6!UBERON:0002358;4.73e-07;6!UBERON:0003684;4.73e-07;6!UBERON:0001178;4.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,6.17e-13,3;UBERON:0007616,6.17e-13,3;UBERON:0002217,6.17e-13,3;UBERON:0002018,6.17e-13,3;UBERON:0003978,8.35e-13,3;UBERON:0009751,8.35e-13,3;UBERON:0000946,8.35e-13,3;UBERON:0002523,8.35e-13,3;UBERON:0005983,8.35e-13,3;UBERON:0002165,8.35e-13,3;UBERON:0002062,8.35e-13,3;UBERON:0007280,8.35e-13,3;UBERON:0004457,2.60e-12,12;UBERON:0000042,2.60e-12,12;UBERON:0002363,1.57e-10,1;UBERON:0007645,1.57e-10,1;UBERON:0007647,1.57e-10,1;UBERON:0010115,1.57e-10,1;UBERON:0002146,2.74e-10,1;UBERON:0005623,2.74e-10,1;UBERON:0002135,3.61e-10,1;UBERON:0003688,5.10e-07,6;UBERON:0002358,5.10e-07,6;UBERON:0003684,5.10e-07,6;UBERON:0001178,5.10e-07,6 | |||
|phase1_expression=0,0,0.422863212287913,3.00219895059391,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,5.51471701699479,1.01392563272577,9.54343136461319,7.78615792484217,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779496041289589,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.128139149255701,2.04682899626681,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37593562403423,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2291479806568,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,2.52746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.60412296808179,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,1.88645166119599,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.470958557103084,0,0,0.913158720509496,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,1.6906229103336,0.679708458751268,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,2.0510303085114,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,2.85677317756488,0,0.248298857183432,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,3.32660356546013,0,0,0,0,2.34640942403454,0.611207220914332,0,0,0.402547587182052,0 | |phase1_expression=0,0,0.422863212287913,3.00219895059391,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,5.51471701699479,1.01392563272577,9.54343136461319,7.78615792484217,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779496041289589,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.128139149255701,2.04682899626681,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37593562403423,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2291479806568,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,2.52746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.60412296808179,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,1.88645166119599,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.470958557103084,0,0,0.913158720509496,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,1.6906229103336,0.679708458751268,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,2.0510303085114,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,2.85677317756488,0,0.248298857183432,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,3.32660356546013,0,0,0,0,2.34640942403454,0.611207220914332,0,0,0.402547587182052,0 | ||
|short_description=p6@ERG | |short_description=p6@ERG | ||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p6@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ERG_5end |
Coexpression cluster: | C4077_aorta_Chondrocyte_colon_trachea_gastrointestinal_heart_synovial |
Association with transcript: | 0bp_to_ENST00000442448, NM_001136154, NM_004449, uc002yxb.2, uc002yxc.3, uc010gnz.2, uc011ael.1_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | B4DN83P11308 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 5.08e-49 | 9 |
carbohydrate secreting cell | 5.08e-49 | 9 |
chondroblast | 2.18e-38 | 6 |
chondrocyte | 2.18e-38 | 6 |
extracellular matrix secreting cell | 3.47e-29 | 15 |
stromal cell | 7.34e-20 | 28 |
synovial cell | 6.17e-13 | 3 |
secretory cell | 9.18e-12 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 6.17e-13 | 3 |
layer of synovial tissue | 6.17e-13 | 3 |
synovial joint | 6.17e-13 | 3 |
synovial membrane of synovial joint | 6.17e-13 | 3 |
valve | 8.35e-13 | 3 |
cardiac mesenchyme | 8.35e-13 | 3 |
cardial valve | 8.35e-13 | 3 |
tunica intima | 8.35e-13 | 3 |
heart layer | 8.35e-13 | 3 |
endocardium | 8.35e-13 | 3 |
endocardial cushion | 8.35e-13 | 3 |
presumptive endocardium | 8.35e-13 | 3 |
cavity lining | 2.60e-12 | 12 |
serous membrane | 2.60e-12 | 12 |
dura mater | 1.57e-10 | 1 |
future meninx | 1.57e-10 | 1 |
ectomeninx | 1.57e-10 | 1 |
future dura mater | 1.57e-10 | 1 |
pulmonary valve | 2.74e-10 | 1 |
semi-lunar valve | 2.74e-10 | 1 |
mitral valve | 3.61e-10 | 1 |
omentum | 5.10e-07 | 6 |
peritoneum | 5.10e-07 | 6 |
abdominal cavity | 5.10e-07 | 6 |
visceral peritoneum | 5.10e-07 | 6 |