FFCP PHASE1:Hg19::chr16:89043934..89043945,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |EntrezGene=863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |HGNC=1537 | ||
|TSSclassifier=strong | |||
|UniProt=O75081 | |UniProt=O75081 | ||
|association_with_transcript=-430bp_to_NM_005187_5end | |association_with_transcript=-430bp_to_NM_005187_5end | ||
|cluster_id=chr16:89043934..89043945,- | |||
|description=CAGE_peak_12_at_CBFA2T3_5end | |description=CAGE_peak_12_at_CBFA2T3_5end | ||
|id=chr16:89043934..89043945,- | |id=chr16:89043934..89043945,- | ||
|ontology_enrichment_celltype=CL:0000037!3.50e-26!172;CL:0000566!3.50e-26!172;CL:0002032!4.53e-26!165;CL:0000837!4.53e-26!165;CL:0000988!3.26e-24!182;CL:0000763!8.73e-17!112;CL:0000049!8.73e-17!112;CL:0000945!1.87e-16!24;CL:0000826!1.87e-16!24;CL:0002274!7.03e-13!5;CL:0000457!7.03e-13!5;CL:0002191!7.03e-13!5;CL:0000097!7.03e-13!5;CL:0000831!7.03e-13!5;CL:0002028!7.03e-13!5;CL:0000838!3.92e-09!52;CL:0000542!6.60e-09!53;CL:0000051!6.60e-09!53;CL:0002031!8.70e-08!124;CL:0000134!1.21e-07!358;CL:0002320!2.53e-07!365;CL:0000163!3.88e-07!9 | |ontology_enrichment_celltype=CL:0000037!3.50e-26!172;CL:0000566!3.50e-26!172;CL:0002032!4.53e-26!165;CL:0000837!4.53e-26!165;CL:0000988!3.26e-24!182;CL:0000763!8.73e-17!112;CL:0000049!8.73e-17!112;CL:0000945!1.87e-16!24;CL:0000826!1.87e-16!24;CL:0002274!7.03e-13!5;CL:0000457!7.03e-13!5;CL:0002191!7.03e-13!5;CL:0000097!7.03e-13!5;CL:0000831!7.03e-13!5;CL:0002028!7.03e-13!5;CL:0000838!3.92e-09!52;CL:0000542!6.60e-09!53;CL:0000051!6.60e-09!53;CL:0002031!8.70e-08!124;CL:0000134!1.21e-07!358;CL:0002320!2.53e-07!365;CL:0000163!3.88e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.06e-26;5!CL:0000163;5.53e-15;9!CL:0000945;1.10e-14;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.66e-26,5;CL:0002028,1.66e-26,5;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000163,4.91e-15,9;CL:0000945,1.02e-14,24;CL:0000826,1.02e-14,24;CL:0000988,2.49e-14,177;CL:0000838,1.69e-09,52;CL:0000542,2.59e-09,53;CL:0000051,2.59e-09,53;CL:0002031,1.31e-08,120;CL:0000763,1.12e-07,108;CL:0000049,1.12e-07,108;CL:0000738,1.72e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.89e-47!31;DOID:1240!6.82e-44!39;DOID:2531!2.87e-38!51;DOID:0060083!2.87e-38!51;DOID:1036!9.65e-22!8;DOID:0050686!3.51e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:630;1.92e-15;1!DOID:0050177;1.92e-15;1!DOID:0050427;1.92e-15;1!DOID:8692;1.66e-11;31!DOID:1240;5.73e-10;39!DOID:1036;5.36e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.34e-15,1;DOID:0050177,1.34e-15,1;DOID:0050427,1.34e-15,1;DOID:1240,7.60e-13,39;DOID:8692,1.70e-11,31;DOID:2531,9.27e-10,51;DOID:0060083,9.27e-10,51;DOID:1036,5.18e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.91e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@CBFA2T3 | |short_description=p12@CBFA2T3 | ||
}} | }} |
Latest revision as of 10:50, 18 September 2015
Short description: | p12@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CBFA2T3_5end |
Coexpression cluster: | NA |
Association with transcript: | -430bp_to_NM_005187_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.66e-26 | 5 |
basophil mast progenitor cell | 1.66e-26 | 5 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
endocrine cell | 4.91e-15 | 9 |
lymphocyte of B lineage | 1.02e-14 | 24 |
pro-B cell | 1.02e-14 | 24 |
hematopoietic cell | 2.49e-14 | 177 |
lymphoid lineage restricted progenitor cell | 1.69e-09 | 52 |
lymphocyte | 2.59e-09 | 53 |
common lymphoid progenitor | 2.59e-09 | 53 |
hematopoietic lineage restricted progenitor cell | 1.31e-08 | 120 |
myeloid cell | 1.12e-07 | 108 |
common myeloid progenitor | 1.12e-07 | 108 |
leukocyte | 1.72e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.34e-15 | 1 |
monogenic disease | 1.34e-15 | 1 |
xeroderma pigmentosum | 1.34e-15 | 1 |
leukemia | 7.60e-13 | 39 |
myeloid leukemia | 1.70e-11 | 31 |
hematologic cancer | 9.27e-10 | 51 |
immune system cancer | 9.27e-10 | 51 |
chronic leukemia | 5.18e-08 | 8 |